GLIS1 (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000009294 T111448_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.767 0.912
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.767 0.912
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.767 0.912
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.767 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000009585 C2H2 ZF 286 311
ENSTGUP00000009585 C2H2 ZF 320 347
ENSTGUP00000009585 C2H2 ZF 354 377
ENSTGUP00000009585 C2H2 ZF 383 407
ENSTGUP00000009585 C2H2 ZF 413 437

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26495 Aegilops tauschii F775_26495 N 0.000
BRADI1G35790 Brachypodium distachyon BRADI1G35790 N 0.000
Cla023847 Citrullus lanatus Cla023847 N 0.000
Cucsa.272470 Cucumis sativus Cucsa.272470 N 0.000
MLOC_22013 Hordeum vulgare MLOC_22013 N 0.000
LPERR06G17810 Leersia perrieri LPERR06G17810 N 0.000
Lus10040069.g Linum usitatissimum Lus10040069.g N 0.000
LjSGA_008446.2 Lotus japonicus LjSGA_008446.2 N 0.000
MTR_1g050502 Medicago truncatula MTR_1g050502 N 0.000
GSMUA_Achr1G19750_001 Musa acuminata GSMUA_Achr1G19750_001 N 0.000
OBART06G21250 Oryza barthii OBART06G21250 N 0.000
OB06G29280 Oryza brachyantha OB06G29280 N 0.000
OGLUM06G22450 Oryza glumaepatula OGLUM06G22450 N 0.000
BGIOSGA023284 Oryza indica BGIOSGA023284 N 0.000
OMERI01G31300 Oryza meridionalis OMERI01G31300 N 0.000
ONIVA06G25200 Oryza nivara ONIVA06G25200 N 0.000
OPUNC06G19380 Oryza punctata OPUNC06G19380 N 0.000
ORUFI06G22890 Oryza rufipogon ORUFI06G22890 N 0.000
BZIP50 Oryza sativa OS06G0622700 N 0.000
Pavir.Da00593 Panicum virgatum Pavir.Da00593 N 0.000
Pavir.Db00825 Panicum virgatum Pavir.Db00825 N 0.000
Si006978m.g Setaria italica Si006978m.g N 0.000
Sb04g006400 Sorghum bicolor Sb04g006400 N 0.000
Sb10g024430 Sorghum bicolor Sb10g024430 N 0.000
Traes_7AL_25850F96F Triticum aestivum Traes_7AL_25850F96F N 0.000
Traes_7DL_3CE000E38 Triticum aestivum Traes_7DL_3CE000E38 N 0.000
TRIUR3_33804 Triticum urartu TRIUR3_33804 N 0.000
GRMZM2G025812 Zea mays GRMZM2G025812 N 0.000