ENSTNIG00000004450 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000004450 T111964_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.762 0.966
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.762 0.966
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007089 C2H2 ZF 93 113
ENSTNIP00000007089 C2H2 ZF 121 143
ENSTNIP00000007089 C2H2 ZF 149 171
ENSTNIP00000007089 C2H2 ZF 177 198

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.000
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.000
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.000
OBART02G28020 Oryza barthii OBART02G28020 N 0.000
OB02G35300 Oryza brachyantha OB02G35300 N 0.000
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.000
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.000
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.000
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.000
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.000
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.000
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.000
ONIVA04G21910 Oryza nivara ONIVA04G21910 N 0.000
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.000
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N 0.000
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.000
OS02G0681900 Oryza sativa OS02G0681900 N 0.000
OS04G0580300 Oryza sativa OS04G0580300 N 0.000
Pavir.Aa00944 Panicum virgatum Pavir.Aa00944 N 0.000
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N 0.000
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.000
Si009601m.g Setaria italica Si009601m.g N 0.000
Si016627m.g Setaria italica Si016627m.g N 0.000
Sb04g031770 Sorghum bicolor Sb04g031770 N 0.000
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.000
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.000
GRMZM2G028438 Zea mays GRMZM2G028438 N 0.000