bcl11ab (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000013751 T112417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.815 0.939
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.815 0.939
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.815 0.939
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.811 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.811 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000035120 C2H2 ZF 467 488
ENSTRUP00000035120 C2H2 ZF 494 516
ENSTRUP00000035120 C2H2 ZF 807 829
ENSTRUP00000035120 C2H2 ZF 835 857
ENSTRUP00000035120 C2H2 ZF 865 888
ENSTRUP00000035121 C2H2 ZF 409 430
ENSTRUP00000035121 C2H2 ZF 436 458
ENSTRUP00000035121 C2H2 ZF 749 771
ENSTRUP00000035121 C2H2 ZF 777 799
ENSTRUP00000035121 C2H2 ZF 807 830
ENSTRUP00000035122 C2H2 ZF 375 396
ENSTRUP00000035122 C2H2 ZF 402 424
ENSTRUP00000035122 C2H2 ZF 715 737
ENSTRUP00000035122 C2H2 ZF 743 765
ENSTRUP00000035122 C2H2 ZF 773 796
ENSTRUP00000035123 C2H2 ZF 375 396
ENSTRUP00000035123 C2H2 ZF 402 424
ENSTRUP00000035123 C2H2 ZF 699 721
ENSTRUP00000035123 C2H2 ZF 727 749
ENSTRUP00000035123 C2H2 ZF 757 780

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_219293 Agaricus bisporus AGABI2DRAFT_219293 N
M378DRAFT_72609 Amanita muscaria M378DRAFT_72609 N
BOTBODRAFT_178587 Botryobasidium botryosum BOTBODRAFT_178587 N
CERSUDRAFT_111616 Ceriporiopsis subvermispora CERSUDRAFT_111616 N
CC1G_00087 Coprinopsis cinerea CC1G_00087 N
DACRYDRAFT_119248 Dacryopinax sp DACRYDRAFT_119248 N
FIBRA_04937 Fibroporia radiculosa FIBRA_04937 N
FOMPIDRAFT_151160 Fomitopsis pinicola FOMPIDRAFT_151160 N
GALMADRAFT_205370 Galerina marginata GALMADRAFT_205370 N
GLOTRDRAFT_114211 Gloeophyllum trabeum GLOTRDRAFT_114211 N
M413DRAFT_16666 Hebeloma cylindrosporum M413DRAFT_16666 N
Genemark.4002_g Heterobasidion annosum Genemark.4002_g N
HETIRDRAFT_311972 Heterobasidion irregulare HETIRDRAFT_311972 N
K443DRAFT_672578 Laccaria amethystina K443DRAFT_672578 N
LACBIDRAFT_292149 Laccaria bicolor LACBIDRAFT_292149 N
Moror_17679 Moniliophthora roreri Moror_17679 N
PHACADRAFT_250391 Phanerochaete carnosa PHACADRAFT_250391 N
PHLGIDRAFT_97590 Phlebiopsis gigantea PHLGIDRAFT_97590 N
PILCRDRAFT_811575 Piloderma croceum PILCRDRAFT_811575 N
PISMIDRAFT_6124 Pisolithus microcarpus PISMIDRAFT_6124 N
M404DRAFT_13091 Pisolithus tinctorius M404DRAFT_13091 N
PLEOSDRAFT_176003 Pleurotus ostreatus PLEOSDRAFT_176003 N
V565_194320 Rhizoctonia solani V565_194320 N
SCHCODRAFT_255185 Schizophyllum commune SCHCODRAFT_255185 N
SCLCIDRAFT_1210072 Scleroderma citrinum SCLCIDRAFT_1210072 N
SERLA73DRAFT_85551 Serpula lacrymans SERLA73DRAFT_85551 N
CY34DRAFT_20706 Suillus luteus CY34DRAFT_20706 N