CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSXMAG00000018241 *(Xiphophorus maculatus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSXMAG00000018241	T114033_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZBTB18 M02916_2.00	Homo sapiens	VMACATCTGGAWN	NWTCCAGATGTKB	SELEX Jolma et al.(2013) ZNF238_1	0.779	0.934
ZBTB18 M02917_2.00	Homo sapiens	NMACATCTGGMHN	NDKCCAGATGTKN	SELEX Jolma et al.(2013) ZNF238_2	0.779	0.934
ZBTB18 M04585_2.00	Homo sapiens	NMACATCTGGMHN	NDKCCAGATGTKN	SELEX Yin et al.(2017) ZBTB18_eDBD_HT-SELEX	0.779	0.934
ZBTB18 M08350_2.00	Homo sapiens	MRCAKCTGG	CCAGMTGYK	ChIP-seq Schmitges et al.(2016) Q99592_2-4.RCADE	0.779	0.934
ZBTB18 M08928_2.00	Homo sapiens	VMRCAKCTGGV	BCCAGMTGYKB	Misc Kulakovskiy et al.(2013) ZBT18_HUMAN.H11MO.0.C	0.779	0.934
ZBTB18 M10282_2.00	Homo sapiens	NNMACATCTGGM	KCCAGATGTKNN	Transfac Matys et al.(2006) V$RP58_01	0.779	0.934
ZBTB18 M10283_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RP58_Q3	0.779	0.934
ZBTB18 M04586_2.00	Homo sapiens	NMACATCTGBHNN	NNDVCAGATGTKN	SELEX Yin et al.(2017) ZBTB18_eDBD_Methyl-HT-SELEX	0.779	0.934
ZBTB18 M08257_2.00	Homo sapiens	NMGCAGCTGCKB	VMGCAGCTGCKN	ChIP-seq Najafabadi et al.(2015b) ZNF238	0.779	0.934
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSXMAP00000018278	C2H2 ZF	381	403	FMCPLCNKVFPSPHILQLHLSSH
ENSXMAP00000018278	C2H2 ZF	422	443	TCTICSKTFSCMYTLKRHERTH
ENSXMAP00000018278	C2H2 ZF	449	471	YTCTTCGKSFQYSHNLSRHAVVH
ENSXMAP00000018278	C2H2 ZF	477	500	HACKWCERRFTQSGDLYRHIRKFH

Links
Other C2H2 ZF family TFs
Other *Xiphophorus maculatus* TFs

73 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
estExt_fgenesh1_kg.C_200097	Phytophthora capsici	estExt_fgenesh1_kg.C_200097	N	0.000
PITG_02143	Phytophthora infestans	PITG_02143	N	0.000
F443_14270	Phytophthora parasitica	F443_14270	N	0.000
Phyra73414	Phytophthora ramorum	Phyra73414	N	0.000
Physo131444	Phytophthora sojae	Physo131444	N	0.000