GL26593 (Drosophila persimilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0164175 T115954_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sna
M03670_2.00 		Drosophila melanogaster
TRCACCTGTYVB
VBRACAGGTGYA		 SELEX
Nitta et al.(2015)
sna_1 		0.775 0.974
sna
M05862_2.00 		Drosophila melanogaster
NNVCACCTGTYNN
NNRACAGGTGBNN		 SMiLE-seq
Isakova et al.(2017)
Sna 		0.775 0.974
sna
M06069_2.00 		Drosophila melanogaster
SMACYTGYBN
NVRCARGTKS		 B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448 		0.775 0.974
sna
M06070_2.00 		Drosophila melanogaster
SCACCTGWYV
BRWCAGGTGS		 B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448 		0.775 0.974
sna
M06071_2.00 		Drosophila melanogaster
MCACCTGTYVHNNN
NNNDBRACAGGTGK		 B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448 		0.775 0.974
sna
M09664_2.00 		Drosophila melanogaster
VMACCTGYB
VRCAGGTKB		 Misc
Kulakovskiy et al.(2009)
sna 		0.775 0.974
sna
M10375_2.00 		Drosophila melanogaster
NKRCACCTGTYNB
VNRACAGGTGYMN		 Transfac
Matys et al.(2006)
I$SN_01 		0.775 0.974
sna
M10376_2.00 		Drosophila melanogaster
WSBHADCAVSTKSK
MSMASBTGHTDVSW		 Transfac
Matys et al.(2006)
I$SN_02 		0.775 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0190700 C2H2 ZF 263 285
FBpp0190700 C2H2 ZF 298 320
FBpp0190700 C2H2 ZF 324 346
FBpp0190700 C2H2 ZF 352 374
FBpp0190700 C2H2 ZF 380 401

Links

Other C2H2 ZF family TFs
Other Drosophila persimilis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene13277-v1.0-hybrid Fragaria vesca gene13277-v1.0-hybrid N 0.000