GM16579 (Drosophila sechellia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0171492 T116068_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.827 1.000
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.827 1.000
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.827 1.000
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.806 0.906
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.806 0.906
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0198056 C2H2 ZF 318 340
FBpp0198056 C2H2 ZF 346 368
FBpp0198056 C2H2 ZF 374 396
FBpp0198056 C2H2 ZF 402 424
FBpp0198056 C2H2 ZF 430 452
FBpp0198056 C2H2 ZF 458 481

Links

Other C2H2 ZF family TFs
Other Drosophila sechellia TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.000
PK09738.1 Cannabis sativa PK09738.1 I 0.000
PK05128.1 Cannabis sativa PK05128.1 D 0.000
Ca_03753 Cicer arietinum Ca_03753 I 0.000
Cla022576 Citrullus lanatus Cla022576 I 0.000
Cla020112 Citrullus lanatus Cla020112 I 0.000
Cla011478 Citrullus lanatus Cla011478 I 0.000
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.000
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.000
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.000
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.000
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.000
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.000
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I 0.000
Thhalv10004701m.g Eutrema salsugineum Thhalv10004701m.g I 0.000
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I 0.000
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.000
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.000
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.000
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I 0.000
mgf007535m Mimulus guttatus mgf007535m I 0.000
mgf013074m Mimulus guttatus mgf013074m I 0.000
mgf012838m Mimulus guttatus mgf012838m I 0.000
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.000
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I 0.000
Pm005087 Prunus mume Pm005087 I 0.000
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I 0.000
Si007043m.g Setaria italica Si007043m.g I 0.000
Sb10g026450 Sorghum bicolor Sb10g026450 I 0.000
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.000
GRMZM2G103647 Zea mays GRMZM2G103647 I 0.000