CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GJ16103
(
Drosophila virilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0203288
T116531_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
scrt
M03673_2.00
Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY
SELEX
Nitta et al.(2015)
scrt_1
0.827
0.991
scrt
M06085_2.00
Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK
B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880
0.827
0.991
scrt
M06086_2.00
Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880
0.827
0.991
scrt
M06087_2.00
Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880
0.827
0.991
CG12605
M03691_2.00
Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY
SELEX
Nitta et al.(2015)
CG12605_1
0.786
0.904
CG12605
M06139_2.00
Drosophila melanogaster
CACCTGTKG
CMACAGGTG
B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481
0.786
0.904
CG12605
M06140_2.00
Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK
B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481
0.786
0.904
SCRT1
M02929_2.00
Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY
SELEX
Jolma et al.(2013)
SCRT1_1
0.785
0.842
SCRT1
M04655_2.00
Homo sapiens
NKCAACAGGTD
HACCTGTTGMN
SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX
0.785
0.842
SCRT1
M08397_2.00
Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY
ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE
0.785
0.842
SCRT1
M04656_2.00
Homo sapiens
NGCRACAGGTD
HACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX
0.785
0.842
SCRT2
M02925_2.00
Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY
SELEX
Jolma et al.(2013)
SCRT2_1
0.774
0.816
SCRT2
M04643_2.00
Homo sapiens
NGCAACAGGTD
HACCTGTTGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX
0.774
0.816
SCRT2
M04644_2.00
Homo sapiens
NGCRACAGGTG
CACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX
0.774
0.816
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0230520
C2H2 ZF
463
485
YTCSECGKQYATSSNLSRHKQTH
FBpp0230520
C2H2 ZF
494
516
KKCHTCGKAYVSMPALAMHVLTH
FBpp0230520
C2H2 ZF
520
542
HSCGVCGKLFSRPWLLQGHLRSH
FBpp0230520
C2H2 ZF
548
570
YGCAHCGKAFADRSNLRAHMQTH
FBpp0230520
C2H2 ZF
576
597
FECKRCHKTFALKSYLNKHLES
Links
Other
C2H2 ZF
family TFs
Other
Drosophila virilis
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000019436
Ailuropoda melanoleuca
ENSAMEG00000019436
N
Alligator_sinensis_CCG012870.1
Alligator sinensis
Alligator_sinensis_CCG012870.1
N
ENSAPLG00000001994
Anas platyrhynchos
ENSAPLG00000001994
N
ENSAPLG00000002091
Anas platyrhynchos
ENSAPLG00000002091
N
ZBTB5
Anolis carolinensis
ENSACAG00000011965
N
Afo_R005132
Aptenodytes forsteri
Afo_R005132
N
ENSAMXG00000004140
Astyanax mexicanus
ENSAMXG00000004140
N
ENSP00000307604-D1
Bos grunniens
ENSP00000307604-D1
N
ZBTB5
Bos taurus
ENSBTAG00000007761
N
ZBTB5
Callithrix jacchus
ENSCJAG00000010502
N
ZBTB5
Canis familiaris
ENSCAFG00000029817
N
Cmyd_10005483
Chelonia mydas
Cmyd_10005483
N
ENSCSAG00000000456
Chlorocebus sabaeus
ENSCSAG00000000456
N
ZBTB5
Choloepus hoffmanni
ENSCHOG00000007877
N
ZBTB5
Dasypus novemcinctus
ENSDNOG00000010253
N
Zbtb5
Dipodomys ordii
ENSDORG00000013170
N
ZBTB5
Echinops telfairi
ENSETEG00000002372
N
ZBTB5
Equus caballus
ENSECAG00000004450
N
ZBTB5
Erinaceus europaeus
ENSEEUG00000011920
N
ZBTB5
Felis catus
ENSFCAG00000013080
N
ENSFALG00000012967
Ficedula albicollis
ENSFALG00000012967
N
ENSGMOG00000003377
Gadus morhua
ENSGMOG00000003377
N
ZBTB5
Gallus gallus
ENSGALG00000005354
N
ZBTB5
Gorilla gorilla
ENSGGOG00000003712
N
ZBTB5
Homo sapiens
ENSG00000168795
N
ENSSTOG00000027806
Ictidomys tridecemlineatus
ENSSTOG00000027806
N
ENSLACG00000004172
Latimeria chalumnae
ENSLACG00000004172
N
ENSLOCG00000012855
Lepisosteus oculatus
ENSLOCG00000012855
N
ZBTB5
Loxodonta africana
ENSLAFG00000014479
N
ENSP00000307604
Macaca fascicularis
ENSP00000307604
N
ZBTB5
Macaca mulatta
ENSMMUG00000017894
N
ENSMEUG00000011041
Macropus eugenii
ENSMEUG00000011041
N
ZBTB5
Meleagris gallopavo
ENSMGAG00000016120
N
ENSMICG00000003671
Microcebus murinus
ENSMICG00000003671
N
ZBTB5
Monodelphis domestica
ENSMODG00000025213
N
ENSMPUG00000018533
Mustela putorius furo
ENSMPUG00000018533
N
Zbtb5
Mus musculus
ENSMUSG00000049657
N
ZBTB5
Myotis lucifugus
ENSMLUG00000012686
N
ENSNLEG00000003629
Nomascus leucogenys
ENSNLEG00000003629
N
ZBTB5
Ochotona princeps
ENSOPRG00000014200
N
ENSONIG00000008925
Oreochromis niloticus
ENSONIG00000008925
N
ZBTB5
Oryctolagus cuniculus
ENSOCUG00000007041
N
ZBTB5
Oryzias latipes
ENSORLG00000005151
N
ZBTB5
Otolemur garnettii
ENSOGAG00000012980
N
ZBTB5
Pan troglodytes
ENSPTRG00000020941
N
ENSPSIG00000003260
Pelodiscus sinensis
ENSPSIG00000003260
N
ENSPFOG00000019621
Poecilia formosa
ENSPFOG00000019621
N
Pvit_15550
Pogona vitticeps
Pvit_15550
N
ENSPPYG00000019062
Pongo abelii
ENSPPYG00000019062
N
ZBTB5
Pteropus vampyrus
ENSPVAG00000007939
N
Zbtb5
Rattus norvegicus
ENSRNOG00000012726
N
ENSSHAG00000015981
Sarcophilus harrisii
ENSSHAG00000015981
N
ZBTB5
Sorex araneus
ENSSARG00000012933
N
ZBTB5
Taeniopygia guttata
ENSTGUG00000007188
N
ZBTB5
Takifugu rubripes
ENSTRUG00000006314
N
ENSTSYG00000014359
Tarsius syrichta
ENSTSYG00000014359
N
ZBTB5
Tetraodon nigroviridis
ENSTNIG00000017813
N
ZBTB5
Tursiops truncatus
ENSTTRG00000008293
N
Tal_R000100
Tyto alba
Tal_R000100
N
zbtb5.L
Xenopus laevis
XB-GENE-1015624
N
zbtb5
Xenopus tropicalis
XB-GENE-1015618
N