CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE10222
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0228096
T116894_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zif
M06148_2.00
Drosophila melanogaster
WHYAACACTR
YAGTGTTRDW
B1H
Zhu et al.(2011)
CG10267_SANGER_5_FBgn0037446
0.827
0.991
Zif
M06149_2.00
Drosophila melanogaster
YNNHHWHYAACACTASNHNN
NNDNSTAGTGTTRDWDDNNR
B1H
Zhu et al.(2011)
CG10267_SOLEXA_5_FBgn0037446
0.827
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0255232
C2H2 ZF
223
245
YICDVCGNFYEKRGRMMEHRRRH
FBpp0255232
C2H2 ZF
251
273
YACELCDAKFQVREQLRKHMYSH
FBpp0255232
C2H2 ZF
279
301
YKCSFCSRQFFYESVLKSHENVH
FBpp0255232
C2H2 ZF
307
329
YVCKVCDKAFAYAHSLTKHELIH
FBpp0255232
C2H2 ZF
335
359
YRCDYCHKDFRLLHHMRQHEETKLH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR11G09550
Leersia perrieri
LPERR11G09550
N
LPERR11G09560
Leersia perrieri
LPERR11G09560
N
OBART11G14710
Oryza barthii
OBART11G14710
N
ORGLA11G0125600
Oryza glaberrima
ORGLA11G0125600
N
OGLUM11G14240
Oryza glumaepatula
OGLUM11G14240
N
BGIOSGA035327
Oryza indica
BGIOSGA035327
N
OMERI11G12050
Oryza meridionalis
OMERI11G12050
N
ONIVA11G14120
Oryza nivara
ONIVA11G14120
N
ORUFI11G15710
Oryza rufipogon
ORUFI11G15710
N
OS11G0512000
Oryza sativa
OS11G0512000
N