CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE12967
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0230679
T116924_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clamp
M01044_2.00
Drosophila melanogaster
YNTCYBKYTC
GARMVRGANR
PBM
Soruco et al.(2013)
CLAMP_Cterm6Zn
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0257977
C2H2 ZF
360
382
FSCNICGGLFSRYSSLWSHKKLH
FBpp0257977
C2H2 ZF
388
410
YKCSICGLAFAKAVYLKNHARIH
FBpp0257977
C2H2 ZF
416
438
YKCQTCGMQFSQSPHLKNHERTH
FBpp0257977
C2H2 ZF
444
466
YVCGVCDKGFARHATLWNHRRIH
FBpp0257977
C2H2 ZF
472
494
YKCEICGSAFSQAAHLKNHAKVH
FBpp0257977
C2H2 ZF
500
522
YKCEICSAAFADRFALKRHRGIH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013172
Aedes aegypti
AAEL013172
I
0.804
AATE019305
Anopheles atroparvus
AATE019305
I
0.804
ACOM024344
Anopheles coluzzii
ACOM024344
I
0.804
ADAC002093
Anopheles darlingi
ADAC002093
I
0.804
AFAF010175
Anopheles farauti
AFAF010175
I
0.804
AFUN000986
Anopheles funestus
AFUN000986
I
0.804
AGAP008827
Anopheles gambiae
AGAP008827
I
0.804
AMEC017754
Anopheles melas
AMEC017754
I
0.804
AMEM008021
Anopheles merus
AMEM008021
I
0.804
ASIS020203
Anopheles sinensis
ASIS020203
I
0.804
BGIBMGA007867
Bombyx mori
BGIBMGA007867
I
0.802
CpipJ_CPIJ007133
Culex pipiens
CpipJ_CPIJ007133
I
0.804
CPIJ007133
Culex quinquefasciatus
CPIJ007133
I
0.804
KGM_17223
Danaus plexippus
KGM_17223
I
0.804
GF13861
Drosophila ananassae
FBgn0090888
I
0.827
GG21465
Drosophila erecta
FBgn0113644
I
0.827
GH10979
Drosophila grimshawi
FBgn0118460
I
0.825
Clamp
Drosophila melanogaster
FBgn0032979
D
0.827
GI17493
Drosophila mojavensis
FBgn0140237
I
0.825
GL26169
Drosophila persimilis
FBgn0163751
I
0.827
GA14887
Drosophila pseudoobscura
FBgn0074913
I
0.827
GM16114
Drosophila sechellia
FBgn0171030
I
0.827
GJ15143
Drosophila virilis
FBgn0202340
I
0.825
GK15349
Drosophila willistoni
FBgn0217354
I
0.825
LCUP003636
Lucilia cuprina
LCUP003636
I
0.814
MESCA000957
Megaselia scalaris
MESCA000957
I
0.812
MDOA009968
Musca domestica
MDOA009968
I
0.812