fgenesh2_kg.4__3062__AT2G48100.3 (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh2_kg.4__3062__AT2G48100.3 T117357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G48100
M06812_2.00 		Arabidopsis thaliana
TGGTGA
TCACCA		 Dap-seq
OMalley et al.(2016)
At2g48100_col_b 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__3062__AT2G48100.3 C2H2 ZF 17 41

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI53104 Acyrthosiphon pisum ACYPI53104 N
AAEL000826 Aedes aegypti AAEL000826 N
AALB009100 Anopheles albimanus AALB009100 N
AATE013995 Anopheles atroparvus AATE013995 N
ACOM037336 Anopheles coluzzii ACOM037336 N
ADAC004556 Anopheles darlingi ADAC004556 N
AGAP002993 Anopheles gambiae AGAP002993 N
AMEC003748 Anopheles melas AMEC003748 N
AMEM008468 Anopheles merus AMEM008468 N
ASIS014267 Anopheles sinensis ASIS014267 N
ASTEI03270 Anopheles stephensi ASTEI03270 N
ACEP12019 Atta cephalotes ACEP12019 N
BGIBMGA002168 Bombyx mori BGIBMGA002168 N
Cflo_05366--XP_001120155.1_APIME Camponotus floridanus Cflo_05366--XP_001120155.1_APIME N
CLEC004985 Cimex lectularius CLEC004985 N
CpipJ_CPIJ019621 Culex pipiens CpipJ_CPIJ019621 N
CPIJ019621 Culex quinquefasciatus CPIJ019621 N
KGM_06311 Danaus plexippus KGM_06311 N
DAPPUDRAFT_196639 Daphnia pulex DAPPUDRAFT_196639 N
GF17275 Drosophila ananassae FBgn0094293 N
GG17407 Drosophila erecta FBgn0109633 N
GH18583 Drosophila grimshawi FBgn0126050 N
CG11966 Drosophila melanogaster FBgn0037645 N
GI24513 Drosophila mojavensis FBgn0147235 N
GL21645 Drosophila persimilis FBgn0159238 N
GA11300 Drosophila pseudoobscura FBgn0071354 N
GM26297 Drosophila sechellia FBgn0181151 N
GJ22686 Drosophila virilis FBgn0209790 N
GK11210 Drosophila willistoni FBgn0213221 N
GE24811 Drosophila yakuba FBgn0241912 N
HHAL008764-PA Halyomorpha halys HHAL008764-PA N
HMEL015339 Heliconius melpomene HMEL015339 N
LDEC005984 Leptinotarsa decemlineata LDEC005984 N
LCUP004423 Lucilia cuprina LCUP004423 N
MCINX001754 Melitaea cinxia MCINX001754 N
MDOA010621 Musca domestica MDOA010621 N
NV13471 Nasonia vitripennis NV13471 N
PHUM221070 Pediculus humanus PHUM221070 N
PPAI000190 Phlebotomus papatasi PPAI000190 N
SINV11338 Solenopsis invicta SINV11338 N
TC003707 Tribolium castaneum TC003707 N
L798_13970 Zootermopsis nevadensis L798_13970 N