GB49901 (Apis mellifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GB49901 T117965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.823 0.974
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.823 0.974
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.823 0.974
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.814 0.957
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.814 0.957
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.814 0.957
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.814 0.957
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.795 0.887
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.795 0.887
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.795 0.887
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.795 0.887
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB49901-PA C2H2 ZF 213 235
GB49901-PA C2H2 ZF 241 263
GB49901-PA C2H2 ZF 269 291
GB49901-PA C2H2 ZF 297 319
GB49901-PA C2H2 ZF 325 347

Links

Other C2H2 ZF family TFs
Other Apis mellifera TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003728 Ailuropoda melanoleuca ENSAMEG00000003728 N 0.000
ANCDUO_13707 Ancylostoma duodenale ANCDUO_13707 N 0.000
L3MBTL1 Anolis carolinensis ENSACAG00000002143 N 0.000
AMEM007577 Anopheles merus AMEM007577 N 0.000
ENSAMXG00000008822 Astyanax mexicanus ENSAMXG00000008822 N 0.000
BGIBMGA002097 Bombyx mori BGIBMGA002097 N 0.000
estExt_fgenesh2_pg.C_5980016 Branchiostoma floridae estExt_fgenesh2_pg.C_5980016 N 0.000
L3MBTL1 Callithrix jacchus ENSCJAG00000003964 N 0.000
L3MBTL1 Canis familiaris ENSCAFG00000009291 N 0.000
ENSCSAG00000014035 Chlorocebus sabaeus ENSCSAG00000014035 N 0.000
L3MBTL1 Choloepus hoffmanni ENSCHOG00000005052 N 0.000
CGI_10007198 Crassostrea gigas CGI_10007198 N 0.000
l3mbtl1a Danio rerio ENSDARG00000014828 N 0.000
DAPPUDRAFT_50461 Daphnia pulex DAPPUDRAFT_50461 N 0.000
L3mbtl1 Dipodomys ordii ENSDORG00000002707 N 0.000
ENSETEG00000013916 Echinops telfairi ENSETEG00000013916 N 0.000
L3MBTL1 Equus caballus ENSECAG00000008175 N 0.000
L3MBTL1 Erinaceus europaeus ENSEEUG00000006232 N 0.000
ENSGMOG00000006059 Gadus morhua ENSGMOG00000006059 N 0.000
ENSGACG00000006074 Gasterosteus aculeatus ENSGACG00000006074 N 0.000
L3MBTL1 Gorilla gorilla ENSGGOG00000034980 N 0.000
HPBE_0001834901 Heligmosomoides bakeri HPBE_0001834901 N 0.000
L3MBTL1 Homo sapiens ENSG00000185513 N 0.000
ENSSTOG00000011672 Ictidomys tridecemlineatus ENSSTOG00000011672 N 0.000
LotgiG235330 Lottia gigantea LotgiG235330 N 0.000
ENSP00000362227 Macaca fascicularis ENSP00000362227 N 0.000
MESCA002178 Megaselia scalaris MESCA002178 N 0.000
L3MBTL1 Microcebus murinus ENSMICG00000015115 N 0.000
L3MBTL1 Monodelphis domestica ENSMODG00000003647 N 0.000
ENSMPUG00000017691 Mustela putorius furo ENSMPUG00000017691 N 0.000
L3mbtl1 Mus musculus ENSMUSG00000035576 N 0.000
Myotis_brandtii_L3MBTL1_10025184 Myotis brandtii Myotis_brandtii_L3MBTL1_10025184 N 0.000
ENSMLUG00000016624 Myotis lucifugus ENSMLUG00000016624 N 0.000
ENSNLEG00000006529 Nomascus leucogenys ENSNLEG00000006529 N 0.000
L3MBTL1 Ochotona princeps ENSOPRG00000002367 N 0.000
Ocbimv22028662m.g Octopus bimaculoides Ocbimv22028662m.g N 0.000
Ogr13959 Ophisaurus gracilis Ogr13959 N 0.000
ENSONIG00000001923 Oreochromis niloticus ENSONIG00000001923 N 0.000
L3MBTL1 Ornithorhynchus anatinus ENSOANG00000014344 N 0.000
L3MBTL1 Oryctolagus cuniculus ENSOCUG00000006662 N 0.000
ENSORLG00000003513 Oryzias latipes ENSORLG00000003513 N 0.000
L3MBTL1 Otolemur garnettii ENSOGAG00000014470 N 0.000
ENSOARG00000003176 Ovis aries ENSOARG00000003176 N 0.000
L3MBTL1 Pan troglodytes ENSPTRG00000013507 N 0.000
ENSPANG00000026135 Papio anubis ENSPANG00000026135 N 0.000
ENSPSIG00000016444 Pelodiscus sinensis ENSPSIG00000016444 N 0.000
ENSPFOG00000022630 Poecilia formosa ENSPFOG00000022630 N 0.000
L3MBTL1 Pteropus vampyrus ENSPVAG00000015234 N 0.000
L3mbtl1 Rattus norvegicus ENSRNOG00000007044 N 0.000
L898_g12863 Steinernema monticolum L898_g12863 N 0.000
L892_g7301 Steinernema scapterisci L892_g7301 N 0.000
SVUK_0001589601 Strongylus vulgaris SVUK_0001589601 N 0.000
ENSSSCG00000007365 Sus scrofa ENSSSCG00000007365 N 0.000
ENSTSYG00000014180 Tarsius syrichta ENSTSYG00000014180 N 0.000
ENSTNIG00000012014 Tetraodon nigroviridis ENSTNIG00000012014 N 0.000
L3MBTL1 Tursiops truncatus ENSTTRG00000012844 N 0.000
l3mbtl1 Xenopus tropicalis XB-GENE-949999 N 0.000
ENSXMAG00000019188 Xiphophorus maculatus ENSXMAG00000019188 N 0.000