GSMUA_Achr11G02250_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr11G02250_001 T118656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.792 0.848
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.826
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.826
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.775 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.775 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.767 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.762 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P02250_001 C2H2 ZF 58 80
GSMUA_Achr11P02250_001 C2H2 ZF 106 128

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

397 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCMIDRAFT_93104 Bipolaris oryzae COCMIDRAFT_93104 N 0.000
COCSADRAFT_33739 Bipolaris sorokiniana COCSADRAFT_33739 N 0.000
COCVIDRAFT_40633 Bipolaris victoriae COCVIDRAFT_40633 N 0.000
COCCADRAFT_91226 Bipolaris zeicola COCCADRAFT_91226 N 0.000
FOXG_13086 Fusarium oxysporum FOXG_13086 N 0.000
FVEG_12449 Fusarium verticillioides FVEG_12449 N 0.000
PMAA_047890 Penicillium marneffei PMAA_047890 N 0.000
PTT_18442 Pyrenophora teres PTT_18442 N 0.000
PTRG_03263 Pyrenophora triticirepentis PTRG_03263 N 0.000
SETTUDRAFT_167635 Setosphaeria turcica SETTUDRAFT_167635 N 0.000
PMAA_047890 Talaromyces marneffei PMAA_047890 N 0.000
TSTA_037850 Talaromyces stipitatus TSTA_037850 N 0.000