HCBG_04116 (Histoplasma capsulatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HCBG_04116 T119093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_04116
M01448_2.00		 Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.798 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01448_2.00 C2H2 ZF 51 73
M01448_2.00 C2H2 ZF 79 103
M01448_2.00 C2H2 ZF 109 131
M01448_2.00 C2H2 ZF 137 161

DNA Binding Domains

Protein ID Domain From To Sequence
EEH07237 C2H2 ZF 118 140
EEH07237 C2H2 ZF 146 170
EEH07237 C2H2 ZF 176 198
EEH07237 C2H2 ZF 204 228

Links

Other C2H2 ZF family TFs
Other Histoplasma capsulatum TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_192406 Agaricus bisporus AGABI2DRAFT_192406 N 0.000
M378DRAFT_161598 Amanita muscaria M378DRAFT_161598 N 0.000
BOTBODRAFT_99602 Botryobasidium botryosum BOTBODRAFT_99602 N 0.000
GALMADRAFT_249169 Galerina marginata GALMADRAFT_249169 N 0.000
M413DRAFT_441925 Hebeloma cylindrosporum M413DRAFT_441925 N 0.000
HETIRDRAFT_385203 Heterobasidion irregulare HETIRDRAFT_385203 N 0.000
JAAARDRAFT_35517 Jaapia argillacea JAAARDRAFT_35517 N 0.000
K443DRAFT_671237 Laccaria amethystina K443DRAFT_671237 N 0.000
LACBIDRAFT_313784 Laccaria bicolor LACBIDRAFT_313784 N 0.000
Moror_6792 Moniliophthora roreri Moror_6792 N 0.000
PAXRUDRAFT_27074 Paxillus rubicundulus PAXRUDRAFT_27074 N 0.000
PHACADRAFT_258400 Phanerochaete carnosa PHACADRAFT_258400 N 0.000
PILCRDRAFT_809917 Piloderma croceum PILCRDRAFT_809917 N 0.000
PIIN_00052 Piriformospora indica PIIN_00052 N 0.000
PLEOSDRAFT_1056240 Pleurotus ostreatus PLEOSDRAFT_1056240 N 0.000
V565_004660 Rhizoctonia solani V565_004660 N 0.000
SCHCODRAFT_110354 Schizophyllum commune SCHCODRAFT_110354 N 0.000
M408DRAFT_34462 Serendipita vermifera M408DRAFT_34462 N 0.000
SERLA73DRAFT_179810 Serpula lacrymans SERLA73DRAFT_179810 N 0.000
CY34DRAFT_802245 Suillus luteus CY34DRAFT_802245 N 0.000