HMEL002306 (Heliconius melpomene)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HMEL002306 T119441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.785 0.868
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.783 0.825
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.783 0.825
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.783 0.825
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.783 0.825
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.757 0.789
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.757 0.789
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.757 0.789
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.757 0.789
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.757 0.789
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.757 0.789
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.757 0.789
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.757 0.789
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.757 0.789
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.757 0.789
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.757 0.789
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.757 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HMEL002306-PA C2H2 ZF 202 224
HMEL002306-PA C2H2 ZF 237 259
HMEL002306-PA C2H2 ZF 263 285
HMEL002306-PA C2H2 ZF 291 313
HMEL002306-PA C2H2 ZF 319 340

Links

Other C2H2 ZF family TFs
Other Heliconius melpomene TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB09078.1 Alternaria brassicicola AB09078.1 I
AOL_s00076g330 Arthrobotrys oligospora AOL_s00076g330 I
MCYG_05256 Arthroderma otae MCYG_05256 I
e_gw1.00172.1.1 Aspergillus carbonarius e_gw1.00172.1.1 I
CADAFLAG00006089 Aspergillus flavus CADAFLAG00006089 I
AFUA_6G05160 Aspergillus fumigatus CADAFUAG00000585 I
ANIA_06503 Aspergillus nidulans CADANIAG00007272 I
CADANGAG00011690 Aspergillus niger CADANGAG00011690 I
ATEG_05658 Aspergillus terreus CADATEAG00000806 I
M437DRAFT_9881 Aureobasidium melanogenum M437DRAFT_9881 I
M438DRAFT_281957 Aureobasidium pullulans M438DRAFT_281957 I
AUEXF2481DRAFT_108778 Aureobasidium subglaciale AUEXF2481DRAFT_108778 I
BAUCODRAFT_68708 Baudoinia compniacensis BAUCODRAFT_68708 N
COCC4DRAFT_163074 Bipolaris maydis COCC4DRAFT_163074 I
COCSADRAFT_136667 Bipolaris sorokiniana COCSADRAFT_136667 I
COCVIDRAFT_108803 Bipolaris victoriae COCVIDRAFT_108803 I
COCCADRAFT_104228 Bipolaris zeicola COCCADRAFT_104228 I
BDDG_09015 Blastomyces dermatitidis BDDG_09015 I
PVAR5_8036 Byssochlamys spectabilis PVAR5_8036 I
CIMG_02603 Coccidioides immitis CIMG_02603 I
CPC735_037450 Coccidioides posadasii CPC735_037450 I
estExt_fgenesh1_pg.C_70029 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_70029 I
W97_05116 Coniosporium apollinis W97_05116 I
H072_4190 Dactylellina haptotyla H072_4190 I
DOTSEDRAFT_72344 Dothistroma septosporum DOTSEDRAFT_72344 I
DRE_05458 Drechslerella stenobrocha DRE_05458 I
EV44_g5109 Erysiphe necator EV44_g5109 I
HCBG_09143 Histoplasma capsulatum HCBG_09143 D
LEMA_P018870.1 Leptosphaeria maculans LEMA_P018870.1 I
MPH_06655 Macrophomina phaseolina MPH_06655 I
MGYG_06299 Microsporum gypseum MGYG_06299 I
gw1.5.564.1 Mycosphaerella fijiensis gw1.5.564.1 N
e_gw1.8.1357.1 Mycosphaerella graminicola e_gw1.8.1357.1 N
NFIA_051730 Neosartorya fischeri CADNFIAG00004445 I
OIDMADRAFT_170457 Oidiodendron maius OIDMADRAFT_170457 N
PABG_06970 Paracoccidioides brasiliensis PABG_06970 I
PAAG_03645 Paracoccidioides sp lutzii PAAG_03645 I
PDE_01025 Penicillium oxalicum PDE_01025 I
MYCFIDRAFT_215419 Pseudocercospora fijiensis MYCFIDRAFT_215419 N
PTT_19009 Pyrenophora teres PTT_19009 I
PTRG_01131 Pyrenophora triticirepentis PTRG_01131 I
SETTUDRAFT_105303 Setosphaeria turcica SETTUDRAFT_105303 I
SNOG_09345 Stagonospora nodorum SNOG_09345 I
TEQG_04727 Trichophyton equinum TEQG_04727 I
H102_02673 Trichophyton rubrum H102_02673 I
H105_02690 Trichophyton soudanense H105_02690 I
TESG_03936 Trichophyton tonsurans TESG_03936 I
GSTUM_00005141001 Tuber melanosporum GSTUM_00005141001 I
PV09_00215 Verruconis gallopava PV09_00215 I
Mycgr3G46610 Zymoseptoria tritici Mycgr3G46610 N