ISCW021315 (Ixodes scapularis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ISCW021315 T120088_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.800 0.877
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.800 0.877
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.800 0.877
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.800 0.877
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.794 0.886
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.794 0.886
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.794 0.886
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.794 0.886
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.784 0.842
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.784 0.842
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.784 0.842
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.776 0.833
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.776 0.833
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.776 0.833
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW021315-PA C2H2 ZF 171 193
ISCW021315-PA C2H2 ZF 202 224
ISCW021315-PA C2H2 ZF 228 250
ISCW021315-PA C2H2 ZF 256 278
ISCW021315-PA C2H2 ZF 284 305

Links

Other C2H2 ZF family TFs
Other Ixodes scapularis TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA002932 Anopheles arabiensis AARA002932 N
AATE021126 Anopheles atroparvus AATE021126 N
ACOM037726 Anopheles coluzzii ACOM037726 N
ACUA013017 Anopheles culicifacies ACUA013017 N
ADIR004658 Anopheles dirus ADIR004658 N
AEPI007520 Anopheles epiroticus AEPI007520 N
AFAF007042 Anopheles farauti AFAF007042 N
AFUN006044 Anopheles funestus AFUN006044 N
AGAP005245 Anopheles gambiae AGAP005245 N
AMAM014680 Anopheles maculatus AMAM014680 N
AMEC008887 Anopheles melas AMEC008887 N
AMEM015618 Anopheles merus AMEM015618 N
AMIN011589 Anopheles minimus AMIN011589 N
AQUA005963 Anopheles quadriannulatus AQUA005963 N
ASTEI05991 Anopheles stephensi ASTEI05991 N
GB53491 Apis mellifera GB53491 N
ACEP17061 Atta cephalotes ACEP17061 N
CLEC008549 Cimex lectularius CLEC008549 N
GF11099 Drosophila ananassae FBgn0088139 N
GG22736 Drosophila erecta FBgn0114901 N
GH20625 Drosophila grimshawi FBgn0128088 N
lola Drosophila melanogaster FBgn0005630 D
GI20185 Drosophila mojavensis FBgn0142921 N
GA30442 Drosophila pseudoobscura FBgn0264579 I
GM20513 Drosophila sechellia FBgn0175395 N
GJ20136 Drosophila virilis FBgn0207276 N
GE13095 Drosophila yakuba FBgn0230797 N
Hsal_00696--XP_001120687.1_APIME Harpegnathos saltator Hsal_00696--XP_001120687.1_APIME N
LCUP002992 Lucilia cuprina LCUP002992 N
LLOJ008818 Lutzomyia longipalpis LLOJ008818 N
MDOA013378 Musca domestica MDOA013378 N
SINV11347 Solenopsis invicta SINV11347 N