CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KTB10507.1
(
Candida glabrata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KTB10507.1
T120801_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KTB10507.1
M01040_2.00
Candida glabrata
NBCCCTKR
YMAGGGVN
PBM
Siggers et al.(2014)
CAGL0L00583gCgla
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAGL0E06116g
M01031_2.00
Candida glabrata
NNBYCCTKDN
NHMAGGRVNN
PBM
Siggers et al.(2014)
CAGLE0611gCgla
0.773
0.761
USV1
M01538_2.00
Saccharomyces cerevisiae
NYCCCTKD
HMAGGGRN
PBM
Zhu et al.(2009)
Usv1
0.765
0.761
USV1
M00041_2.00
Saccharomyces cerevisiae
NCCCCTGD
HCAGGGGN
PBM
Badis et al.(2008)
YPL230W_2051
0.765
0.761
USV1
M08544_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
Misc
DeBoer et al.(2011)
YPL230W_509
0.765
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01040_2.00
C2H2 ZF
40
65
FKCEGYEDCSMAFTRAEHHARHIRKH
M01040_2.00
C2H2 ZF
71
94
FQCDICMKFFSRIDNLKQHKDSVH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KTB10507.1
C2H2 ZF
41
66
FKCEGYEDCSMAFTRAEHHARHIRKH
KTB10507.1
C2H2 ZF
72
95
FQCDICMKFFSRIDNLKQHKDSVH
Links
Other
C2H2 ZF
family TFs
Other
Candida glabrata
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00516
Acanthocheilonema viteae
nAv.1.0.1.g00516
N
ANCCEY_08318
Ancylostoma ceylanicum
ANCCEY_08318
N
ACOC_0000735101
Angiostrongylus costaricensis
ACOC_0000735101
N
ASU_12421
Ascaris suum
ASU_12421
N
Bm4516
Brugia malayi
Bm4516
N
BTMF_0000196601
Brugia timori
BTMF_0000196601
N
BXY_0943600
Bursaphelenchus xylophilus
BXY_0943600
N
CBN08911
Caenorhabditis brenneri
CBN08911
N
CBG12652
Caenorhabditis briggsae
CBG12652
N
let-607
Caenorhabditis elegans
WBGene00002783
N
CJA17455
Caenorhabditis japonica
CJA17455
N
CRE24738
Caenorhabditis remanei
CRE24738
N
DICVIV_10160
Dictyocaulus viviparus
DICVIV_10160
N
nDi.2.2.2.g01644
Dirofilaria immitis
nDi.2.2.2.g01644
N
DME_0000611701
Dracunculus medinensis
DME_0000611701
N
GPLIN_001183200
Globodera pallida
GPLIN_001183200
N
HCOI01581600
Haemonchus contortus
HCOI01581600
N
LOAG_10644
Loa loa
LOAG_10644
N
NECAME_02209
Necator americanus
NECAME_02209
N
PTRK_0001321400
Parastrongyloides trichosuri
PTRK_0001321400
N
PTRK_0000278100
Parastrongyloides trichosuri
PTRK_0000278100
N
RSKR_0000919500
Rhabditophanes kr3021
RSKR_0000919500
N
L596_g8102
Steinernema carpocapsae
L596_g8102
N
L889_g21858
Steinernema feltiae
L889_g21858
N
L893_g27569
Steinernema glaseri
L893_g27569
N
L898_g616
Steinernema monticolum
L898_g616
N
L892_g27212
Steinernema scapterisci
L892_g27212
N
SPAL_0001235900
Strongyloides papillosus
SPAL_0001235900
N
SPAL_0001311500
Strongyloides papillosus
SPAL_0001311500
N
SSTP_0000280500
Strongyloides stercoralis
SSTP_0000280500
N
SSTP_0000575300
Strongyloides stercoralis
SSTP_0000575300
N
SVE_0150100
Strongyloides venezuelensis
SVE_0150100
N
SVE_0362500
Strongyloides venezuelensis
SVE_0362500
N
WUBG_03758
Wuchereria bancrofti
WUBG_03758
N