LELG_02331 (Lodderomyces elongisporus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LELG_02331 T121271_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN

NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.792 0.913
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN

NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.792 0.848
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN

NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.758 0.739
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN

NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.758 0.739
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS

SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.758 0.739
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS

SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.758 0.739
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW

WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.758 0.739
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM

KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.758 0.739
MIG1
M10392_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.758 0.739
MIG1
M10393_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.758 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDK44152 C2H2 ZF 129 151
EDK44152 C2H2 ZF 157 181

Links

Other C2H2 ZF family TFs
Other Lodderomyces elongisporus TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG007907.1 Alligator sinensis Alligator_sinensis_CCG007907.1 N
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N
ENSCJAG00000033913 Callithrix jacchus ENSCJAG00000033913 N
ENSMMUP00000017448 Macaca fascicularis ENSMMUP00000017448 N
ENSMMUG00000013266 Macaca mulatta ENSMMUG00000013266 N
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N
HMGB1 Monodelphis domestica ENSMODG00000004443 N
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N
ENSOGAG00000033550 Otolemur garnettii ENSOGAG00000033550 N
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N
ENSOGAG00000032147 Otolemur garnettii ENSOGAG00000032147 N
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N
ENSPANG00000011772 Papio anubis ENSPANG00000011772 N
ENSTBEG00000013995 Tupaia belangeri ENSTBEG00000013995 N