CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MELLADRAFT_61177
(
Melampsora laricipopulina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
MELLADRAFT_61177
T123124_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_01797
M01451_2.00
Puccinia graminis
NGCTGKGN
NCMCAGCN
PBM
Najafabadi et al.(2015a)
pTH10233
0.776
0.756
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGG09475
C2H2 ZF
184
206
ICETCGLGFTRNERLRYHVERVH
EGG09475
C2H2 ZF
213
238
HACELEGCNRAFRQRSDLLRHQRTVH
Links
Other
C2H2 ZF
family TFs
Other
Melampsora laricipopulina
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy