MLOC_57580 (Hordeum vulgare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MLOC_57580 T123605_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_57580.1 C2H2 ZF 12 34
MLOC_57580.1 C2H2 ZF 35 58
MLOC_57580.3 C2H2 ZF 12 34
MLOC_57580.3 C2H2 ZF 35 58
MLOC_57580.4 C2H2 ZF 12 34
MLOC_57580.4 C2H2 ZF 35 58

Links

Other C2H2 ZF family TFs
Other Hordeum vulgare TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_19799 Aegilops tauschii F775_19799 N 0.827
AMTR_s00011p00256770 Amborella trichopoda AMTR_s00011p00256770 N 0.803
Aquca_030_00311 Aquilegia coerulea Aquca_030_00311 N 0.803
BRADI4G38000 Brachypodium distachyon BRADI4G38000 N 0.827
evm.TU.supercontig_30.114 Carica papaya evm.TU.supercontig_30.114 N 0.803
Cla010033 Citrullus lanatus Cla010033 N 0.784
Ciclev10015448m.g Citrus clementina Ciclev10015448m.g N 0.803
orange1.1g015397m.g Citrus sinensis orange1.1g015397m.g N 0.803
Cucsa.048660 Cucumis sativus Cucsa.048660 N 0.784
gene19969-v1.0-hybrid Fragaria vesca gene19969-v1.0-hybrid N 0.803
GLYMA05G34280 Glycine max GLYMA05G34280 N 0.803
GLYMA08G05390 Glycine max GLYMA08G05390 N 0.803
Gorai.008G050900 Gossypium raimondii Gorai.008G050900 N 0.803
LPERR09G15520 Leersia perrieri LPERR09G15520 N 0.827
Lus10038373.g Linum usitatissimum Lus10038373.g N 0.784
Lus10036234.g Linum usitatissimum Lus10036234.g N 0.784
chr4.CM0042.1850.nd Lotus japonicus chr4.CM0042.1850.nd N 0.784
cassava20557.m1 Manihot esculenta cassava20557.m1 N 0.803
mgf015709m Mimulus guttatus mgf015709m N 0.803
mgf015174m Mimulus guttatus mgf015174m N 0.803
mgf011479m Mimulus guttatus mgf011479m N 0.803
GSMUA_Achr11G18180_001 Musa acuminata GSMUA_Achr11G18180_001 N 0.803
GSMUA_Achr11G13680_001 Musa acuminata GSMUA_Achr11G13680_001 N 0.803
GSMUA_Achr10G20960_001 Musa acuminata GSMUA_Achr10G20960_001 N 0.803
OBART09G19610 Oryza barthii OBART09G19610 N 0.827
OB09G26240 Oryza brachyantha OB09G26240 N 0.827
ORGLA09G0158300 Oryza glaberrima ORGLA09G0158300 N 0.827
BGIOSGA029268 Oryza indica BGIOSGA029268 N 0.827
ONIVA09G20740 Oryza nivara ONIVA09G20740 N 0.827
ORUFI10G16430 Oryza rufipogon ORUFI10G16430 N 0.827
OS09G0560900 Oryza sativa OS09G0560900 N 0.827
POPTR_0003s07180 Populus trichocarpa POPTR_0003s07180 N 0.803
POPTR_0001s16080 Populus trichocarpa POPTR_0001s16080 N 0.803
Pm010813 Prunus mume Pm010813 N 0.803
29994.m000464 Ricinus communis 29994.m000464 N 0.803
SapurV1A.0104s0210 Salix purpurea SapurV1A.0104s0210 N 0.784
SapurV1A.0273s0180 Salix purpurea SapurV1A.0273s0180 N 0.803
SapurV1A.3784s0010 Salix purpurea SapurV1A.3784s0010 N 0.803
Solyc02g081620.2 Solanum lycopersicum Solyc02g081620.2 N 0.803
PGSC0003DMG401017733 Solanum tuberosum PGSC0003DMG401017733 N 0.803
TCM_005999 Theobroma cacao TCM_005999 N 0.803
Traes_5BL_6688D6ECE Triticum aestivum Traes_5BL_6688D6ECE N 0.827
TRIUR3_07451 Triticum urartu TRIUR3_07451 N 0.827
SUF4 Vitis vinifera VIT_01s0011g01240 N 0.784