MLOC_70662 (Hordeum vulgare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MLOC_70662 T123617_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.756 0.696
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.756 0.696
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.756 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_70662.1 C2H2 ZF 67 89
MLOC_70662.1 C2H2 ZF 125 147

Links

Other C2H2 ZF family TFs
Other Hordeum vulgare TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AZF1 Arabidopsis thaliana AT5G67450 D
Bo2g168030 Brassica oleracea Bo2g168030 I
Bo9g019120 Brassica oleracea Bo9g019120 I
Bra031834 Brassica rapa Bra031834 I
Bra037845 Brassica rapa Bra037845 I
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I