MTR_1g106730 (Medicago truncatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MTR_1g106730 T123782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.822 0.913
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.803 0.891
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.696
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.796 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.796 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.796 0.826
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.783
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES62753 C2H2 ZF 83 105
AES62753 C2H2 ZF 131 153

Links

Other C2H2 ZF family TFs
Other Medicago truncatula TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003886 Ailuropoda melanoleuca ENSAMEG00000003886 I 0.000
ENSBTAP00000005749-D1 Bos grunniens ENSBTAP00000005749-D1 I 0.000
STAT2 Bos taurus ENSBTAG00000004380 I 0.000
ENSCJAG00000011101 Callithrix jacchus ENSCJAG00000011101 I 0.000
ENSCAFG00000000121 Canis familiaris ENSCAFG00000000121 I 0.000
ENSCAFG00000017707 Canis familiaris ENSCAFG00000017707 I 0.000
STAT2 Cavia porcellus ENSCPOG00000014930 I 0.000
ENSCSAG00000005161 Chlorocebus sabaeus ENSCSAG00000005161 I 0.000
STAT2 Choloepus hoffmanni ENSCHOG00000012984 I 0.000
STAT2 Dasypus novemcinctus ENSDNOG00000011002 I 0.000
Stat2 Dipodomys ordii ENSDORG00000012958 I 0.000
STAT2 Echinops telfairi ENSETEG00000012048 I 0.000
STAT2 Equus caballus ENSECAG00000022326 I 0.000
STAT2 Felis catus ENSFCAG00000012023 I 0.000
STAT2 Gorilla gorilla ENSGGOG00000006127 I 0.000
STAT2 Homo sapiens ENSG00000170581 D 0.000
ENSSTOG00000015985 Ictidomys tridecemlineatus ENSSTOG00000015985 I 0.000
STAT2 Loxodonta africana ENSLAFG00000014890 I 0.000
ENSP00000315768 Macaca fascicularis ENSP00000315768 I 0.000
STAT2 Macaca mulatta ENSMMUG00000000803 I 0.000
ENSMPUG00000001431 Mustela putorius furo ENSMPUG00000001431 I 0.000
Stat2 Mus musculus ENSMUSG00000040033 D 0.000
Myotis_brandtii_STAT2_10009187 Myotis brandtii Myotis_brandtii_STAT2_10009187 I 0.000
STAT2 Myotis lucifugus ENSMLUG00000006785 I 0.000
ENSNLEG00000017494 Nomascus leucogenys ENSNLEG00000017494 I 0.000
ENSOARG00000009154 Ovis aries ENSOARG00000009154 I 0.000
STAT2 Pan troglodytes ENSPTRG00000005095 I 0.000
ENSPANG00000012539 Papio anubis ENSPANG00000012539 I 0.000
STAT2 Procavia capensis ENSPCAG00000007855 I 0.000
STAT2 Pteropus vampyrus ENSPVAG00000007596 I 0.000
Stat2 Rattus norvegicus ENSRNOG00000031081 I 0.000
ENSSHAG00000000508 Sarcophilus harrisii ENSSHAG00000000508 I 0.000