OBART09G12250 (Oryza barthii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OBART09G12250 T124657_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.759 0.884
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.759 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G12250.1 C2H2 ZF 144 165
OBART09G12250.1 C2H2 ZF 165 191

Links

Other C2H2 ZF family TFs
Other Oryza barthii TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009725 Ailuropoda melanoleuca ENSAMEG00000009725 N
ENSAPLG00000013219 Anas platyrhynchos ENSAPLG00000013219 N
ZNF536 Anolis carolinensis ENSACAG00000012257 N
Afo_R009641 Aptenodytes forsteri Afo_R009641 N
ENSAMXG00000006281 Astyanax mexicanus ENSAMXG00000006281 N
ENSBTAP00000009552-D1 Bos grunniens ENSBTAP00000009552-D1 N
ZNF536 Bos taurus ENSBTAG00000007262 N
Brh_R002111 Buceros rhinoceros Brh_R002111 N
ZNF536 Callithrix jacchus ENSCJAG00000018365 N
Aan_R003374 Calypte anna Aan_R003374 N
ZNF536 Canis familiaris ENSCAFG00000007601 N
ZNF536 Cavia porcellus ENSCPOG00000008744 N
ENSCSAG00000004832 Chlorocebus sabaeus ENSCSAG00000004832 N
znf536 Danio rerio ENSDARG00000103648 N
ZNF536 Dasypus novemcinctus ENSDNOG00000008027 N
ZNF536 Equus caballus ENSECAG00000013732 N
ZNF536 Erinaceus europaeus ENSEEUG00000009769 N
ZNF536 Felis catus ENSFCAG00000014303 N
ENSGMOG00000000302 Gadus morhua ENSGMOG00000000302 N
ENSGALG00000004510 Gallus gallus ENSGALG00000004510 N
znf536 Gasterosteus aculeatus ENSGACG00000014234 N
Gfo_R015099 Geospiza fortis Gfo_R015099 N
ZNF536 Gorilla gorilla ENSGGOG00000013640 N
ZNF536 Homo sapiens ENSG00000198597 N
ENSLOCG00000005719 Lepisosteus oculatus ENSLOCG00000005719 N
ZNF536 Loxodonta africana ENSLAFG00000017731 N
ENSP00000347730 Macaca fascicularis ENSP00000347730 N
ENSMMUG00000008645 Macaca mulatta ENSMMUG00000008645 N
ENSMEUG00000009907 Macropus eugenii ENSMEUG00000009907 N
ZNF536 Meleagris gallopavo ENSMGAG00000005440 N
ZNF536 Monodelphis domestica ENSMODG00000012653 N
ENSMPUG00000007989 Mustela putorius furo ENSMPUG00000007989 N
Zfp536 Mus musculus ENSMUSG00000043456 N
ENSNLEG00000007605 Nomascus leucogenys ENSNLEG00000007605 N
ZNF536 Ochotona princeps ENSOPRG00000009314 N
ENSONIG00000003511 Oreochromis niloticus ENSONIG00000003511 N
ZNF536 Ornithorhynchus anatinus ENSOANG00000002991 N
ZNF536 Oryctolagus cuniculus ENSOCUG00000022631 N
ZNF536 Otolemur garnettii ENSOGAG00000003997 N
ENSOARG00000004111 Ovis aries ENSOARG00000004111 N
ZNF536 Pan troglodytes ENSPTRG00000010786 N
ENSPANG00000016643 Papio anubis ENSPANG00000016643 N
ENSPSIG00000007065 Pelodiscus sinensis ENSPSIG00000007065 N
ENSPFOG00000011945 Poecilia formosa ENSPFOG00000011945 N
Pvit_19178 Pogona vitticeps Pvit_19178 N
ENSPPYG00000009811 Pongo abelii ENSPPYG00000009811 N
Zfp536 Rattus norvegicus ENSRNOG00000014163 N
ENSSHAG00000013353 Sarcophilus harrisii ENSSHAG00000013353 N
ZNF536 Sus scrofa ENSSSCG00000029234 N
ZNF536 Taeniopygia guttata ENSTGUG00000009013 N
znf536 Takifugu rubripes ENSTRUG00000005430 N
znf536 Tetraodon nigroviridis ENSTNIG00000002948 N
ZNF536 Tupaia belangeri ENSTBEG00000002295 N
ZNF536 Tursiops truncatus ENSTTRG00000009847 N
znf536 Xenopus tropicalis XB-GENE-985016 N
ENSXMAG00000000995 Xiphophorus maculatus ENSXMAG00000000995 N