CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART11G14300
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART11G14300
T124663_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART11G14300.1
C2H2 ZF
61
83
SCSVCWRVYPTSRLLSIHISEAH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00013p00046610
Amborella trichopoda
AMTR_s00013p00046610
N
0.788
GSMUA_Achr6G16600_001
Musa acuminata
GSMUA_Achr6G16600_001
N
0.800
ORGLA11G0122000
Oryza glaberrima
ORGLA11G0122000
N
0.827
OGLUM11G13870
Oryza glumaepatula
OGLUM11G13870
N
0.827
BGIOSGA035306
Oryza indica
BGIOSGA035306
N
0.827
OLONG_002987
Oryza longistaminata
OLONG_002987
N
0.827
OMERI11G11960
Oryza meridionalis
OMERI11G11960
N
0.827
OS11G0498400
Oryza sativa
OS11G0498400
N
0.827
Solyc02g094170.2
Solanum lycopersicum
Solyc02g094170.2
N
0.827
PGSC0003DMG400020210
Solanum tuberosum
PGSC0003DMG400020210
N
0.827
Traes_3DS_4F293F5BA
Triticum aestivum
Traes_3DS_4F293F5BA
N
0.827
VIT_14s0068g01930
Vitis vinifera
VIT_14s0068g01930
N
0.827