OGLUM03G38900 (Oryza glumaepatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OGLUM03G38900 T124722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.784 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.784 0.761
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.783 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G38900.1 C2H2 ZF 55 77
OGLUM03G38900.1 C2H2 ZF 109 131

Links

Other C2H2 ZF family TFs
Other Oryza glumaepatula TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G61477 Brachypodium distachyon BRADI1G61477 I 0.000
OBART07G23470 Oryza barthii OBART07G23470 I 0.000
OPUNC07G22140 Oryza punctata OPUNC07G22140 I 0.000
Pavir.Ia03290 Panicum virgatum Pavir.Ia03290 I 0.000
Sb02g040550 Sorghum bicolor Sb02g040550 I 0.000
Traes_2AS_8C5E619C6 Triticum aestivum Traes_2AS_8C5E619C6 I 0.000
Traes_2DS_6BAF1825F Triticum aestivum Traes_2DS_6BAF1825F I 0.000
GRMZM2G075122 Zea mays GRMZM2G075122 I 0.000