CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM12G09840
(
Oryza glumaepatula
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OGLUM12G09840
T124762_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G09840.1
C2H2 ZF
1254
1277
FPCDIEGCDMSFSTQQDLLLHKRD
OGLUM12G09840.1
C2H2 ZF
1307
1331
LKCTWKGCKKAFKWPWARTEHMRVH
OGLUM12G09840.1
C2H2 ZF
1337
1363
YECQEPGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Oryza glumaepatula
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN04745
Caenorhabditis brenneri
CBN04745
N
CBG01341
Caenorhabditis briggsae
CBG01341
N
CBG06500
Caenorhabditis briggsae
CBG06500
N
nhr-157
Caenorhabditis elegans
WBGene00015900
N
nhr-158
Caenorhabditis elegans
WBGene00015901
N
nhr-159
Caenorhabditis elegans
WBGene00015902
N
CRE07834
Caenorhabditis remanei
CRE07834
N