ONIVA01G41740 (Oryza nivara)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ONIVA01G41740 T124934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.780 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.779 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.779 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.769 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.769 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.759 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.758 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA01G41740.1 C2H2 ZF 43 65
ONIVA01G41740.1 C2H2 ZF 92 114

Links

Other C2H2 ZF family TFs
Other Oryza nivara TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005235 Ailuropoda melanoleuca ENSAMEG00000005235 N
Alligator_sinensis_CCG000203.1 Alligator sinensis Alligator_sinensis_CCG000203.1 N
USF3 Anolis carolinensis ENSACAG00000006745 N
Afo_R005482 Aptenodytes forsteri Afo_R005482 N
ENSP00000420721-D1 Bos grunniens ENSP00000420721-D1 N
USF3 Bos taurus ENSBTAG00000021000 N
Brh_R007650 Buceros rhinoceros Brh_R007650 N
USF3 Callithrix jacchus ENSCJAG00000020264 N
USF3 Canis familiaris ENSCAFG00000010692 N
ENSCPOG00000006428 Cavia porcellus ENSCPOG00000006428 N
ENSCSAG00000006785 Chlorocebus sabaeus ENSCSAG00000006785 N
usf3 Danio rerio ENSDARG00000077431 N
USF3 Dasypus novemcinctus ENSDNOG00000040900 N
USF3 Equus caballus ENSECAG00000024549 N
USF3 Felis catus ENSFCAG00000004876 N
ENSFALG00000005129 Ficedula albicollis ENSFALG00000005129 N
ENSGMOG00000015548 Gadus morhua ENSGMOG00000015548 N
ENSGALG00000014808 Gallus gallus ENSGALG00000014808 N
usf3 Gasterosteus aculeatus ENSGACG00000003204 N
Gfo_R000246 Geospiza fortis Gfo_R000246 N
USF3 Homo sapiens ENSG00000176542 N
ENSSTOG00000029223 Ictidomys tridecemlineatus ENSSTOG00000029223 N
ENSLACG00000009844 Latimeria chalumnae ENSLACG00000009844 N
ENSLOCG00000003056 Lepisosteus oculatus ENSLOCG00000003056 N
USF3 Loxodonta africana ENSLAFG00000009455 N
ENSP00000420721 Macaca fascicularis ENSP00000420721 N
ENSMEUG00000005560 Macropus eugenii ENSMEUG00000005560 N
USF3 Meleagris gallopavo ENSMGAG00000014246 N
USF3 Monodelphis domestica ENSMODG00000018158 N
Usf3 Mus musculus ENSMUSG00000068284 N
Myotis_brandtii_KIAA2018_10016078 Myotis brandtii Myotis_brandtii_KIAA2018_10016078 N
USF3 Myotis lucifugus ENSMLUG00000004274 N
ENSNLEG00000004615 Nomascus leucogenys ENSNLEG00000004615 N
USF3 Ochotona princeps ENSOPRG00000014253 N
ENSONIG00000014090 Oreochromis niloticus ENSONIG00000014090 N
USF3 Oryctolagus cuniculus ENSOCUG00000013550 N
usf3 Oryzias latipes ENSORLG00000009097 N
USF3 Otolemur garnettii ENSOGAG00000032665 N
ENSOARG00000019468 Ovis aries ENSOARG00000019468 N
USF3 Pan troglodytes ENSPTRG00000030159 N
ENSPANG00000019193 Papio anubis ENSPANG00000019193 N
ENSPFOG00000009350 Poecilia formosa ENSPFOG00000009350 N
Pvit_04479 Pogona vitticeps Pvit_04479 N
ENSPPYG00000013537 Pongo abelii ENSPPYG00000013537 N
USF3 Pteropus vampyrus ENSPVAG00000006151 N
Usf3 Rattus norvegicus ENSRNOG00000027756 N
ENSSHAG00000006667 Sarcophilus harrisii ENSSHAG00000006667 N
USF3 Sus scrofa ENSSSCG00000011918 N
ENSTGUG00000013682 Taeniopygia guttata ENSTGUG00000013682 N
ENSTGUG00000013363 Taeniopygia guttata ENSTGUG00000013363 N
USF3 Tursiops truncatus ENSTTRG00000000281 N
Tal_R000800 Tyto alba Tal_R000800 N
USF3 Vicugna pacos ENSVPAG00000011950 N
usf3 Xenopus tropicalis XB-GENE-6459248 N
ENSXMAG00000010050 Xiphophorus maculatus ENSXMAG00000010050 N