CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G03550
(
Oryza nivara
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ONIVA03G03550
T124948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G03550.1
C2H2 ZF
540
563
FQCEIDYCRMTFKNRAELSVHKKN
ONIVA03G03550.1
C2H2 ZF
564
587
TCTVKSCGRHFRSHKYLRRHQSIH
ONIVA03G03550.1
C2H2 ZF
623
646
YKCTTPGCSKIYKFVSDFTRHKRR
Links
Other
C2H2 ZF
family TFs
Other
Oryza nivara
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin111154
Clonorchis sinensis
csin111154
N
T265_13597
Opisthorchis viverrini
T265_13597
N
Sjc_0078280
Schistosoma japonicum
Sjc_0078280
N
Smp_078550
Schistosoma mansoni
Smp_078550
N
SMTD_0002136501
Schistosoma mattheei
SMTD_0002136501
N