ONIVA03G10380 (Oryza nivara)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ONIVA03G10380 T124950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.812 0.952
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.812 0.952
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA03G10380.1 C2H2 ZF 179 200
ONIVA03G10380.1 C2H2 ZF 200 225

Links

Other C2H2 ZF family TFs
Other Oryza nivara TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
znf652 Danio rerio ENSDARG00000062302 I
ZNF652 Echinops telfairi ENSETEG00000017186 N
ENSLACG00000007479 Latimeria chalumnae ENSLACG00000007479 N
Zfp652 Mus musculus ENSMUSG00000075595 D
ENSNLEG00000027071 Nomascus leucogenys ENSNLEG00000027071 N
Ogr13999 Ophisaurus gracilis Ogr13999 N
ENSSHAG00000002263 Sarcophilus harrisii ENSSHAG00000002263 I
ZNF652 Sorex araneus ENSSARG00000000812 N
ZNF652 Tetraodon nigroviridis ENSTNIG00000002892 N