ORUFI03G13310 (Oryza rufipogon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORUFI03G13310 T125150_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.786 0.795
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.786 0.795
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.776 0.773
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.772 0.818
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.772 0.818
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.773
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.763 0.818
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI03G13310.1 C2H2 ZF 51 73
ORUFI03G13310.1 C2H2 ZF 96 116

Links

Other C2H2 ZF family TFs
Other Oryza rufipogon TFs

372 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB03935.1 Alternaria brassicicola AB03935.1 N
AB00597.1 Alternaria brassicicola AB00597.1 N
M437DRAFT_55860 Aureobasidium melanogenum M437DRAFT_55860 I
M438DRAFT_332335 Aureobasidium pullulans M438DRAFT_332335 N
AUEXF2481DRAFT_61161 Aureobasidium subglaciale AUEXF2481DRAFT_61161 N
BAUCODRAFT_138682 Baudoinia compniacensis BAUCODRAFT_138682 N
COCC4DRAFT_124149 Bipolaris maydis COCC4DRAFT_124149 N
COCC4DRAFT_200873 Bipolaris maydis COCC4DRAFT_200873 N
COCMIDRAFT_21935 Bipolaris oryzae COCMIDRAFT_21935 N
COCMIDRAFT_82835 Bipolaris oryzae COCMIDRAFT_82835 N
COCSADRAFT_155567 Bipolaris sorokiniana COCSADRAFT_155567 N
COCSADRAFT_40583 Bipolaris sorokiniana COCSADRAFT_40583 N
COCVIDRAFT_12967 Bipolaris victoriae COCVIDRAFT_12967 N
COCVIDRAFT_26374 Bipolaris victoriae COCVIDRAFT_26374 N
COCCADRAFT_99387 Bipolaris zeicola COCCADRAFT_99387 N
COCCADRAFT_3377 Bipolaris zeicola COCCADRAFT_3377 N
fgenesh1_pg.C_scaffold_13000086 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_13000086 N
DOTSEDRAFT_75913 Dothistroma septosporum DOTSEDRAFT_75913 N
LEMA_P046620.1 Leptosphaeria maculans LEMA_P046620.1 N
fgenesh1_pg.C_chr_12000059 Mycosphaerella graminicola fgenesh1_pg.C_chr_12000059 N
SNOG_08725 Phaeosphaeria nodorum SNOG_08725 N
PTT_01276 Pyrenophora teres PTT_01276 N
PTT_14925 Pyrenophora teres PTT_14925 N
PTRG_04376 Pyrenophora triticirepentis PTRG_04376 N
PTRG_08828 Pyrenophora triticirepentis PTRG_08828 N
SETTUDRAFT_135369 Setosphaeria turcica SETTUDRAFT_135369 N
SETTUDRAFT_161746 Setosphaeria turcica SETTUDRAFT_161746 N
SEPMUDRAFT_152192 Sphaerulina musiva SEPMUDRAFT_152192 N
SNOG_08725 Stagonospora nodorum SNOG_08725 N
Mycgr3G96927 Zymoseptoria tritici Mycgr3G96927 N