PGSC0003DMG400034322 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG400034322 T125848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.805 0.783
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.799 0.761
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.799 0.761
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.799 0.761
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.776 0.761
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.769 0.696
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.769 0.674
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.765 0.696
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.765 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400084751 C2H2 ZF 100 122
PGSC0003DMT400084751 C2H2 ZF 157 179

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_02363 Arthroderma benhamiae ARB_02363 I
MCYG_07496 Arthroderma otae MCYG_07496 I
fgenesh1_pm.00815_#_161 Aspergillus carbonarius fgenesh1_pm.00815_#_161 I
ACLA_072680 Aspergillus clavatus CADACLAG00007101 I
CADAFLAG00007043 Aspergillus flavus CADAFLAG00007043 I
ANIA_07553 Aspergillus nidulans CADANIAG00000659 D
CADANGAG00012028 Aspergillus niger CADANGAG00012028 I
CADAORAG00008796 Aspergillus oryzae CADAORAG00008796 I
EURHEDRAFT_466620 Aspergillus ruber EURHEDRAFT_466620 I
ATEG_07822 Aspergillus terreus CADATEAG00002604 I
BDDG_01384 Blastomyces dermatitidis BDDG_01384 I
A1O1_05505 Capronia coronata A1O1_05505 I
A1O3_09089 Capronia epimyces A1O3_09089 I
PV04_07191 Capronia semiimmersa PV04_07191 I
Z519_07413 Cladophialophora bantiana Z519_07413 I
G647_03336 Cladophialophora carrionii G647_03336 I
PV07_10892 Cladophialophora immunda PV07_10892 I
A1O5_02882 Cladophialophora psammophila A1O5_02882 I
A1O7_06770 Cladophialophora yegresii A1O7_06770 I
CIMG_02390 Coccidioides immitis CIMG_02390 I
CPC735_040250 Coccidioides posadasii CPC735_040250 I
HMPREF1541_08225 Cyphellophora europaea HMPREF1541_08225 I
EPUS_00980 Endocarpon pusillum EPUS_00980 I
A1O9_01370 Exophiala aquamarina A1O9_01370 I
HMPREF1120_07727 Exophiala dermatitidis HMPREF1120_07727 I
PV10_03132 Exophiala mesophila PV10_03132 I
PV06_05419 Exophiala oligosperma PV06_05419 I
PV11_09241 Exophiala sideris PV11_09241 I
PV08_01890 Exophiala spinifera PV08_01890 I
PV05_09605 Exophiala xenobiotica PV05_09605 I
Z517_09982 Fonsecaea pedrosoi Z517_09982 I
MCYG_07496 Microsporum canis MCYG_07496 I
MGYG_05268 Microsporum gypseum MGYG_05268 I
NFIA_090030 Neosartorya fischeri CADNFIAG00007681 I
PABG_11809 Paracoccidioides brasiliensis PABG_11809 I
PAAG_01669 Paracoccidioides sp lutzii PAAG_01669 I
Pc12g01260 Penicillium chrysogenum Pc12g01260 I
PDIP_04140 Penicillium digitatum PDIP_04140 I
PEX1_057330 Penicillium expansum PEX1_057330 I
PITC_021050 Penicillium italicum PITC_021050 I
PMAA_100990 Penicillium marneffei PMAA_100990 I
PDE_06375 Penicillium oxalicum PDE_06375 I
PCH_Pc12g01260 Penicillium rubens PCH_Pc12g01260 I
U727_0043136061 Penicillium solitum U727_0043136061 I
Z518_09094 Rhinocladiella mackenziei Z518_09094 I
PMAA_100990 Talaromyces marneffei PMAA_100990 I
TSTA_057660 Talaromyces stipitatus TSTA_057660 I
H101_07404 Trichophyton interdigitale H101_07404 I
H102_06799 Trichophyton rubrum H102_06799 I
H105_06838 Trichophyton soudanense H105_06838 I
TRV_01981 Trichophyton verrucosum TRV_01981 I
UREG_01372 Uncinocarpus reesii UREG_01372 I