PGSC0003DMG401030312 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG401030312 T125857_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.783
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.783
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.785 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.776 0.739
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.776 0.739
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.764 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.762 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400077934 C2H2 ZF 38 60
PGSC0003DMT400077934 C2H2 ZF 84 106

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

401 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00083g463 Arthrobotrys oligospora AOL_s00083g463 I 0.000
e_gw1.00866.172.1 Aspergillus carbonarius e_gw1.00866.172.1 I 0.000
CADAFLAG00002515 Aspergillus flavus CADAFLAG00002515 I 0.000
AFUA_3G11250 Aspergillus fumigatus CADAFUAG00005698 I 0.000
ANIA_04873 Aspergillus nidulans CADANIAG00005532 I 0.000
CADANGAG00002216 Aspergillus niger CADANGAG00002216 I 0.000
CADAORAG00001279 Aspergillus oryzae CADAORAG00001279 I 0.000
EURHEDRAFT_515807 Aspergillus ruber EURHEDRAFT_515807 I 0.000
ATEG_04658 Aspergillus terreus CADATEAG00009335 I 0.000
BBA_01304 Beauveria bassiana BBA_01304 I 0.000
Bcin02g07540 Botrytis cinerea Bcin02g07540 I 0.000
PVAR5_7714 Byssochlamys spectabilis PVAR5_7714 I 0.000
A1O1_03114 Capronia coronata A1O1_03114 I 0.000
A1O3_01974 Capronia epimyces A1O3_01974 I 0.000
PV04_04915 Capronia semiimmersa PV04_04915 I 0.000
CTHT_0018750 Chaetomium thermophilum CTHT_0018750 I 0.000
G647_04328 Cladophialophora carrionii G647_04328 I 0.000
PV07_07651 Cladophialophora immunda PV07_07651 I 0.000
A1O7_04367 Cladophialophora yegresii A1O7_04367 I 0.000
CPUR_04347 Claviceps purpurea CPUR_04347 I 0.000
CFIO01_07503 Colletotrichum fioriniae CFIO01_07503 I 0.000
CGGC5_13371 Colletotrichum gloeosporioides CGGC5_13371 I 0.000
GLRG_01973 Colletotrichum graminicola GLRG_01973 I 0.000
CH063_01293 Colletotrichum higginsianum CH063_01293 I 0.000
Cob_06009 Colletotrichum orbiculare Cob_06009 I 0.000
CSUB01_04252 Colletotrichum sublineola CSUB01_04252 I 0.000
CCM_01294 Cordyceps militaris CCM_01294 I 0.000
HMPREF1541_09309 Cyphellophora europaea HMPREF1541_09309 I 0.000
H072_10673 Dactylellina haptotyla H072_10673 I 0.000
EPUS_07921 Endocarpon pusillum EPUS_07921 I 0.000
EV44_g6127 Erysiphe necator EV44_g6127 I 0.000
UCREL1_8337 Eutypa lata UCREL1_8337 I 0.000
A1O9_00612 Exophiala aquamarina A1O9_00612 I 0.000
HMPREF1120_06603 Exophiala dermatitidis HMPREF1120_06603 I 0.000
PV10_00143 Exophiala mesophila PV10_00143 I 0.000
PV06_04279 Exophiala oligosperma PV06_04279 I 0.000
PV11_04194 Exophiala sideris PV11_04194 I 0.000
PV08_10349 Exophiala spinifera PV08_10349 I 0.000
PV05_09372 Exophiala xenobiotica PV05_09372 I 0.000
Z517_12080 Fonsecaea pedrosoi Z517_12080 I 0.000
FFUJ_13548 Fusarium fujikuroi FFUJ_13548 I 0.000
FGRRES_06311 Fusarium graminearum FGRRES_06311 I 0.000
FOXG_08063 Fusarium oxysporum FOXG_08063 I 0.000
FPSE_01182 Fusarium pseudograminearum FPSE_01182 I 0.000
NechaG38204 Fusarium solani NechaG38204 I 0.000
FVEG_04985 Fusarium verticillioides FVEG_04985 I 0.000
GGTG_05592 Gaeumannomyces graminis GGTG_05592 I 0.000
CMQ_5441 Grosmannia clavigera CMQ_5441 I 0.000
MAPG_04524 Magnaporthe poae MAPG_04524 I 0.000
MAC_04654 Metarhizium acridum MAC_04654 I 0.000
MAM_00034 Metarhizium album MAM_00034 I 0.000
MANI_117684 Metarhizium anisopliae MANI_117684 I 0.000
MBR_02972 Metarhizium brunneum MBR_02972 I 0.000
MGU_00040 Metarhizium guizhouense MGU_00040 I 0.000
MAJ_07370 Metarhizium majus MAJ_07370 I 0.000
X797_001037 Metarhizium robertsii X797_001037 I 0.000
MYCTH_2308260 Myceliophthora thermophila MYCTH_2308260 I 0.000
e_gw1.3.1240.1 Nectria haematococca e_gw1.3.1240.1 I 0.000
NFIA_066040 Neosartorya fischeri CADNFIAG00006379 I 0.000
NCU06907 Neurospora crassa NCU06907 D 0.000
estExt_fgenesh2_pg.C_80281 Neurospora discreta estExt_fgenesh2_pg.C_80281 I 0.000
NEUTE1DRAFT_130988 Neurospora tetrasperma NEUTE1DRAFT_130988 I 0.000
OIDMADRAFT_103771 Oidiodendron maius OIDMADRAFT_103771 I 0.000
OCS_03275 Ophiocordyceps sinensis OCS_03275 I 0.000
F503_03781 Ophiostoma piceae uamh F503_03781 I 0.000
PFICI_12570 Pestalotiopsis fici PFICI_12570 I 0.000
PODANS_5_11890 Podospora anserina PODANS_5_11890 I 0.000
GMDG_06980 Pseudogymnoascus destructans GMDG_06980 I 0.000
V499_09093 Pseudogymnoascus pannorum V499_09093 I 0.000
Z518_09813 Rhinocladiella mackenziei Z518_09813 I 0.000
SAPIO_CDS4389 Scedosporium apiospermum SAPIO_CDS4389 I 0.000
SBOR_8019 Sclerotinia borealis SBOR_8019 I 0.000
SMAC_05878 Sordaria macrospora SMAC_05878 I 0.000
SPBR_02307 Sporothrix brasiliensis SPBR_02307 I 0.000
HMPREF1624_02827 Sporothrix schenckii HMPREF1624_02827 I 0.000
S40288_02152 Stachybotrys chartarum S40288_02152 I 0.000
S40285_02311 Stachybotrys chlorohalonata S40285_02311 I 0.000
THITE_2117700 Thielavia terrestris THITE_2117700 I 0.000
UCRPA7_7147 Togninia minima UCRPA7_7147 I 0.000
VHEMI07645 Torrubiella hemipterigena VHEMI07645 I 0.000
TRIATDRAFT_150201 Trichoderma atroviride TRIATDRAFT_150201 I 0.000
TRIREDRAFT_121584 Trichoderma reesei TRIREDRAFT_121584 I 0.000
TRIVIDRAFT_82456 Trichoderma virens TRIVIDRAFT_82456 I 0.000
GSTUM_00007462001 Tuber melanosporum GSTUM_00007462001 I 0.000
UV8b_4535 Ustilaginoidea virens UV8b_4535 I 0.000
VDBG_03095 Verticillium albo atrum VDBG_03095 I 0.000
VDBG_03095 Verticillium alfalfae VDBG_03095 I 0.000
VDAG_04003 Verticillium dahliae VDAG_04003 I 0.000