CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHUM527180
(
Pediculus humanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PHUM527180
T126234_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.798
0.906
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.798
0.906
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.798
0.906
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.794
0.891
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.794
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM527180-PA
C2H2 ZF
53
75
FVCSECGKVFNAHYNLTRHMPVH
PHUM527180-PA
C2H2 ZF
81
103
FICKICGKGFRQASTLCRHKIIH
PHUM527180-PA
C2H2 ZF
109
131
HKCLTCGKAFNRSSTLNTHTRIH
PHUM527180-PA
C2H2 ZF
137
159
FVCELCGKGFHQKGNYKNHKLTH
PHUM527180-PA
C2H2 ZF
165
187
YKCNVCSKAFHQVYNLTFHMHTH
PHUM527180-PA
C2H2 ZF
193
216
YTCKICRKGFCRNFDLKKHVRKLH
Links
Other
C2H2 ZF
family TFs
Other
Pediculus humanus
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL001033
Aedes aegypti
AAEL001033
N
0.000
AGAP003982
Anopheles gambiae
AGAP003982
N
0.000
CpipJ_CPIJ007224
Culex pipiens
CpipJ_CPIJ007224
N
0.000
CPIJ007224
Culex quinquefasciatus
CPIJ007224
N
0.000
YQE_11195
Dendroctonus ponderosae
YQE_11195
N
0.000
LDEC018179
Leptinotarsa decemlineata
LDEC018179
N
0.000
MCINX005293
Melitaea cinxia
MCINX005293
N
0.000
RPRC012768
Rhodnius prolixus
RPRC012768
N
0.000