CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_052400
(
Talaromyces marneffei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PMAA_052400
T126706_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03043
M01193_2.00
Neurospora crassa
NNNNNATCNN
NNGATNNNNN
PBM
Lambert et al.(2019)
pTH8622
0.798
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEA21432
C2H2 ZF
283
305
HKCKVCDKRFTRPSSLQTHMYSH
EEA21432
C2H2 ZF
311
335
YACDVEGCGRHFSVVSNLRRHKKVH
Links
Other
C2H2 ZF
family TFs
Other
Talaromyces marneffei
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy