PTRG_01771 (Pyrenophora triticirepentis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PTRG_01771 T127208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_02507
M01447_2.00 		Histoplasma capsulatum
NNCCCCTKD
HMAGGGGNN		 PBM
Najafabadi et al.(2015a)
pTH10217 		0.827 0.978
NCU05064
M01883_2.00 		Neurospora crassa
NNYMCCTKD
HMAGGKRNN		 PBM
Weirauch et al.(2014)
pTH8949 		0.803 0.956
CaO19.723
M01037_2.00 		Candida albicans
VCCCCTKD
HMAGGGGB		 PBM
Siggers et al.(2014)
Bcr1_Orf19.723Calb 		0.760 0.800
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDU41209 C2H2 ZF 138 163
EDU41209 C2H2 ZF 169 191

Links

Other C2H2 ZF family TFs
Other Pyrenophora triticirepentis TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB98 Arabidopsis lyrata scaffold_702543.1 I 0.000
MYB98 Arabidopsis thaliana AT4G18770 D 0.000
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I 0.000
Bo1g019910 Brassica oleracea Bo1g019910 I 0.000
Bo3g157300 Brassica oleracea Bo3g157300 I 0.000
Bra013346 Brassica rapa Bra013346 I 0.000
Bra020992 Brassica rapa Bra020992 I 0.000
Bra012579 Brassica rapa Bra012579 I 0.000
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I 0.000
Carubv10006734m.g Capsella rubella Carubv10006734m.g I 0.000
Ca_19427 Cicer arietinum Ca_19427 I 0.000
Ca_17087 Cicer arietinum Ca_17087 I 0.000
Ca_07482 Cicer arietinum Ca_07482 I 0.000
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.000
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.000
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.000
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I 0.000
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.000
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.000
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.000
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.000
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.000
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.000
Lus10039966.g Linum usitatissimum Lus10039966.g I 0.000
MDP0000215359 Malus domestica MDP0000215359 I 0.000
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.000
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.000
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.000
MTR_1g057980 Medicago truncatula MTR_1g057980 N 0.000
MTR_7g451170 Medicago truncatula MTR_7g451170 N 0.000
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.000
MTR_4g088015 Medicago truncatula MTR_4g088015 I 0.000
MTR_7g037130 Medicago truncatula MTR_7g037130 N 0.000
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.000
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.000
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.000
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.000
Pm024743 Prunus mume Pm024743 I 0.000
Pm015681 Prunus mume Pm015681 I 0.000
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.000
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.000
Si039046m.g Setaria italica Si039046m.g I 0.000
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.000
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I 0.000
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.000
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I 0.000
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.000
TCM_016909 Theobroma cacao TCM_016909 I 0.000
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.000