CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV09_06060
(
Verruconis gallopava
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV09_06060
T127627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.787
0.899
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.787
0.899
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.786
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW02612
C2H2 ZF
423
448
YKCDFPGCTAPPFQTSYLLNSHANVH
KIW02612
C2H2 ZF
454
483
HYCPVPGCPRGEGGKGFKRKNEMIRHGLVH
KIW02612
C2H2 ZF
488
514
YVCPFCPDREHKYPRPDNLQRHVRVHH
KIW02613
C2H2 ZF
406
431
YKCDFPGCTAPPFQTSYLLNSHANVH
KIW02613
C2H2 ZF
437
466
HYCPVPGCPRGEGGKGFKRKNEMIRHGLVH
KIW02613
C2H2 ZF
471
497
YVCPFCPDREHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Verruconis gallopava
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB44837
Apis mellifera
GB44837
N
SINV25566
Solenopsis invicta
SINV25566
N