Sb10g031270 (Sorghum bicolor)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Sb10g031270 T128261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.787 0.804
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.781 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.781 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.769 0.696
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.769 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.761 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.756 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g031270.1 C2H2 ZF 52 74
Sb10g031270.1 C2H2 ZF 113 135

Links

Other C2H2 ZF family TFs
Other Sorghum bicolor TFs

397 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB03118.1 Alternaria brassicicola AB03118.1 I 0.000
ARB_05322 Arthroderma benhamiae ARB_05322 I 0.000
MCYG_04979 Arthroderma otae MCYG_04979 I 0.000
AGOS_AGR198C Ashbya gossypii AGOS_AGR198C I 0.000
M437DRAFT_42083 Aureobasidium melanogenum M437DRAFT_42083 I 0.000
M438DRAFT_316511 Aureobasidium pullulans M438DRAFT_316511 I 0.000
AUEXF2481DRAFT_43803 Aureobasidium subglaciale AUEXF2481DRAFT_43803 I 0.000
COCC4DRAFT_131332 Bipolaris maydis COCC4DRAFT_131332 I 0.000
COCMIDRAFT_27992 Bipolaris oryzae COCMIDRAFT_27992 I 0.000
COCSADRAFT_191180 Bipolaris sorokiniana COCSADRAFT_191180 I 0.000
COCVIDRAFT_17132 Bipolaris victoriae COCVIDRAFT_17132 I 0.000
COCCADRAFT_38888 Bipolaris zeicola COCCADRAFT_38888 I 0.000
BDDG_00259 Blastomyces dermatitidis BDDG_00259 I 0.000
PVAR5_5878 Byssochlamys spectabilis PVAR5_5878 I 0.000
CAGL0H05621g Candida glabrata CAGL0H05621g I 0.000
CORT_0E04370 Candida orthopsilosis CORT_0E04370 I 0.000
CPAG_01728 Candida parapsilosis CPAG_01728 I 0.000
A1O1_05243 Capronia coronata A1O1_05243 I 0.000
A1O3_09529 Capronia epimyces A1O3_09529 I 0.000
PV04_07501 Capronia semiimmersa PV04_07501 I 0.000
Z519_11638 Cladophialophora bantiana Z519_11638 I 0.000
G647_03030 Cladophialophora carrionii G647_03030 I 0.000
PV07_11277 Cladophialophora immunda PV07_11277 I 0.000
A1O5_02336 Cladophialophora psammophila A1O5_02336 I 0.000
A1O7_07076 Cladophialophora yegresii A1O7_07076 I 0.000
CIMG_07638 Coccidioides immitis CIMG_07638 I 0.000
CPC735_043100 Coccidioides posadasii CPC735_043100 I 0.000
estExt_fgenesh1_pm.C_30002 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_30002 I 0.000
W97_01089 Coniosporium apollinis W97_01089 I 0.000
HMPREF1541_07944 Cyphellophora europaea HMPREF1541_07944 I 0.000
H072_1342 Dactylellina haptotyla H072_1342 N 0.000
DOTSEDRAFT_71657 Dothistroma septosporum DOTSEDRAFT_71657 I 0.000
DRE_05946 Drechslerella stenobrocha DRE_05946 N 0.000
EPUS_00923 Endocarpon pusillum EPUS_00923 I 0.000
Ecym_7060 Eremothecium cymbalariae Ecym_7060 I 0.000
A1O9_04901 Exophiala aquamarina A1O9_04901 I 0.000
HMPREF1120_02025 Exophiala dermatitidis HMPREF1120_02025 I 0.000
PV10_07771 Exophiala mesophila PV10_07771 I 0.000
PV06_00786 Exophiala oligosperma PV06_00786 I 0.000
PV11_00659 Exophiala sideris PV11_00659 I 0.000
PV08_00691 Exophiala spinifera PV08_00691 I 0.000
PV05_05426 Exophiala xenobiotica PV05_05426 I 0.000
Z517_02667 Fonsecaea pedrosoi Z517_02667 I 0.000
HCBG_00204 Histoplasma capsulatum HCBG_00204 I 0.000
MEF2A Homo sapiens ENSG00000068305 D 0.000
KAFR_0E00800 Kazachstania africana KAFR_0E00800 I 0.000
KAFR_0I00730 Kazachstania africana KAFR_0I00730 I 0.000
KNAG_0A01830 Kazachstania naganishii KNAG_0A01830 I 0.000
KLLA0_E24025g Kluyveromyces lactis KLLA0_E24025g I 0.000
KLTH0E13156g Kluyveromyces thermotolerans KLTH0E13156g I 0.000
PAS_chr4_0093 Komagataella pastoris PAS_chr4_0093 I 0.000
SAKL0H09416g Lachancea kluyveri SAKL0H09416g I 0.000
LALA0_S04e02938g Lachancea lanzarotensis LALA0_S04e02938g I 0.000
KLTH0E13156g Lachancea thermotolerans KLTH0E13156g I 0.000
LEMA_P028590.1 Leptosphaeria maculans LEMA_P028590.1 I 0.000
MPH_05126 Macrophomina phaseolina MPH_05126 I 0.000
MCYG_04979 Microsporum canis MCYG_04979 I 0.000
MGYG_07902 Microsporum gypseum MGYG_07902 I 0.000
GNLVRS01_PISO0M22936g Millerozyma farinosa GNLVRS01_PISO0M22936g I 0.000
estExt_fgenesh1_pm.C_110082 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_110082 I 0.000
NCAS_0C01980 Naumovozyma castellii NCAS_0C01980 I 0.000
NDAI_0E02700 Naumovozyma dairenensis NDAI_0E02700 I 0.000
UCRNP2_3485 Neofusicoccum parvum UCRNP2_3485 I 0.000
PABG_01574 Paracoccidioides brasiliensis PABG_01574 I 0.000
PAAG_00645 Paracoccidioides sp lutzii PAAG_00645 I 0.000
PMAA_013140 Penicillium marneffei PMAA_013140 I 0.000
XP_002493499.1 Pichia pastoris XP_002493499.1 I 0.000
MYCFIDRAFT_72135 Pseudocercospora fijiensis MYCFIDRAFT_72135 I 0.000
PTT_15886 Pyrenophora teres PTT_15886 I 0.000
PTRG_08080 Pyrenophora triticirepentis PTRG_08080 I 0.000
Z518_09438 Rhinocladiella mackenziei Z518_09438 I 0.000
SU7_0243 Saccharomyces arboricola SU7_0243 I 0.000
SU7_3566 Saccharomyces arboricola SU7_3566 I 0.000
1645_YBR182C Saccharomyces bayanus 1645_YBR182C I 0.000
25226_YPL089C Saccharomyces bayanus 25226_YPL089C I 0.000
Scas_Contig664.4 Saccharomyces castellii Scas_Contig664.4 I 0.000
SMP1 Saccharomyces cerevisiae YBR182C D 0.000
RLM1 Saccharomyces cerevisiae YPL089C D 0.000
SKUD_178506 Saccharomyces kudriavzevii SKUD_178506 I 0.000
SKUD_205813 Saccharomyces kudriavzevii SKUD_205813 I 0.000
21954_YPL089C Saccharomyces mikatae 21954_YPL089C I 0.000
572_YBR182C Saccharomyces mikatae 572_YBR182C I 0.000
1735_Multiple Saccharomyces paradoxus 1735_Multiple I 0.000
SAPIO_CDS1437 Scedosporium apiospermum SAPIO_CDS1437 I 0.000
SETTUDRAFT_183592 Setosphaeria turcica SETTUDRAFT_183592 I 0.000
SNOG_15194 Stagonospora nodorum SNOG_15194 I 0.000
PMAA_013140 Talaromyces marneffei PMAA_013140 I 0.000
TSTA_004010 Talaromyces stipitatus TSTA_004010 I 0.000
TBLA_0H03770 Tetrapisispora blattae TBLA_0H03770 I 0.000
TPHA_0A01340 Tetrapisispora phaffii TPHA_0A01340 I 0.000
TDEL_0A05090 Torulaspora delbrueckii TDEL_0A05090 I 0.000
TEQG_02757 Trichophyton equinum TEQG_02757 I 0.000
H101_08129 Trichophyton interdigitale H101_08129 I 0.000
H102_05233 Trichophyton rubrum H102_05233 I 0.000
H105_05252 Trichophyton soudanense H105_05252 I 0.000
TESG_06676 Trichophyton tonsurans TESG_06676 I 0.000
TRV_06898 Trichophyton verrucosum TRV_06898 I 0.000
GSTUM_00008714001 Tuber melanosporum GSTUM_00008714001 I 0.000
UREG_07644 Uncinocarpus reesii UREG_07644 I 0.000
Kpol_1048p48 Vanderwaltozyma polyspora Kpol_1048p48 I 0.000
PV09_04800 Verruconis gallopava PV09_04800 I 0.000
ZYRO0A13464g Zygosaccharomyces rouxii ZYRO0A13464g I 0.000