CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_02906
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_02906
T128979_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC10331
C2H2 ZF
233
255
YICQTCNKAFSRPSSLRIHSHSH
CCC10331
C2H2 ZF
261
286
FKCPHAGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_06618
Chaetomium globosum
CHGG_06618
I
0.000
CTHT_0011610
Chaetomium thermophilum
CTHT_0011610
I
0.000
CMQ_5180
Grosmannia clavigera
CMQ_5180
I
0.000
MYCTH_2310857
Myceliophthora thermophila
MYCTH_2310857
I
0.000
NCU01924
Neurospora crassa
NCU01924
D
0.000
F503_03643
Ophiostoma piceae uamh
F503_03643
I
0.000
PODANS_1_20900
Podospora anserina
PODANS_1_20900
I
0.000
SS1G_05175
Sclerotinia sclerotiorum
SS1G_05175
I
0.000
SPBR_04855
Sporothrix brasiliensis
SPBR_04855
I
0.000
HMPREF1624_05122
Sporothrix schenckii
HMPREF1624_05122
I
0.000
THITE_2111441
Thielavia terrestris
THITE_2111441
I
0.000