CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_07701
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_07701
T129004_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05024
M01882_2.00
Neurospora crassa
NNNGCCTCNN
NNGAGGCNNN
PBM
Weirauch et al.(2014)
pTH8933
0.800
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC14902
C2H2 ZF
192
216
YHCSNCGTSSNTKRDHERHLSTKKH
CCC14902
C2H2 ZF
239
271
YHCLAPSCEYSRGGGKTFTREDNLWRHMKTAHH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TcIL3000.0.18120
Trypanosoma congolense
TcIL3000.0.18120
N
TcIL3000.0.39420
Trypanosoma congolense
TcIL3000.0.39420
N
TvY486_0001990
Trypanosoma vivax
TvY486_0001990
N
TvY486_0017390
Trypanosoma vivax
TvY486_0017390
N
TvY486_0025730
Trypanosoma vivax
TvY486_0025730
N
TvY486_0032390
Trypanosoma vivax
TvY486_0032390
N
TvY486_0043070
Trypanosoma vivax
TvY486_0043070
N