CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SS1G_02974
(
Sclerotinia sclerotiorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SS1G_02974
T129830_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03043
M01193_2.00
Neurospora crassa
NNNNNATCNN
NNGATNNNNN
PBM
Lambert et al.(2019)
pTH8622
0.792
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO00114
C2H2 ZF
329
358
SSSTLKKHKCKICEKRFTRPSSLQTHMYSH
EDO00114
C2H2 ZF
364
388
FPCDYEGCGRHFSVVSNLRRHKKVH
Links
Other
C2H2 ZF
family TFs
Other
Sclerotinia sclerotiorum
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g066950
Brassica oleracea
Bo7g066950
N
Bo7g067390
Brassica oleracea
Bo7g067390
N
Bo9g055750
Brassica oleracea
Bo9g055750
N
Bra018124
Brassica rapa
Bra018124
N