CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TC002803
(
Tribolium castaneum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TC002803
T129949_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.773
0.850
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT
ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.773
0.850
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.773
0.850
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TC002803-PA
C2H2 ZF
128
150
HECNDCGKRYSTSSNLARHRQTH
TC002803-PA
C2H2 ZF
160
181
RCPHCDKLYVSMPAFSMHVRTH
TC002803-PA
C2H2 ZF
185
207
CKCQYCGKCFSRPWLLQGHIRTH
TC002803-PA
C2H2 ZF
213
235
FKCTICNKAFADKSNLRAHIQTH
TC002803-PA
C2H2 ZF
241
262
HICGRCGKAFALKSYLYKHEES
Links
Other
C2H2 ZF
family TFs
Other
Tribolium castaneum
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.13540
Candida albicans
CaO19.13540
I
0.000
CaO19.6121
Candida albicans
CaO19.6121
D
0.000
CD36_33070
Candida dubliniensis
CD36_33070
I
0.000
PGUG_03478
Candida guilliermondii
PGUG_03478
N
0.000
G210_4804
Candida maltosa
G210_4804
I
0.000
CORT_0D04470
Candida orthopsilosis
CORT_0D04470
I
0.000
CPAG_00149
Candida parapsilosis
CPAG_00149
I
0.000
CTRG_03074
Candida tropicalis
CTRG_03074
I
0.000
DEHA2E03828g
Debaryomyces hansenii
DEHA2E03828g
I
0.000
PGUG_03478
Meyerozyma guilliermondii
PGUG_03478
N
0.000
GNLVRS01_PISO0K16554g
Millerozyma farinosa
GNLVRS01_PISO0K16554g
I
0.000
GNLVRS01_PISO0L16555g
Millerozyma farinosa
GNLVRS01_PISO0L16555g
I
0.000
estExt_fgenesh1_pg.C_chr_7.10133
Pichia stipitis
estExt_fgenesh1_pg.C_chr_7.10133
I
0.000
PICST_68294
Scheffersomyces stipitis
PICST_68294
I
0.000