CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TC010234 *(Tribolium castaneum)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	TC010234	T130055_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
opa M03668_2.00	Drosophila melanogaster	BVCCCCCCRYNGHB	VDCNRYGGGGGGBV	SELEX Nitta et al.(2015) opa_1	0.812	0.978
opa M05861_2.00	Drosophila melanogaster	VCCCCCCRYNGNK	MNCNRYGGGGGGB	SMiLE-seq Isakova et al.(2017) Opa	0.812	0.978
opa M06468_2.00	Drosophila melanogaster	GMCCCCCCGCDG	CHGCGGGGGGKC	B1H Mathelier et al.(2014) MA0456.1	0.812	0.978
opa M06062_2.00	Drosophila melanogaster	GMCCCCCCRCDG	CHGYGGGGGGKC	B1H Zhu et al.(2011) opa_NAR_FBgn0003002	0.812	0.978
opa M06063_2.00	Drosophila melanogaster	MKVMMCCCCMCYR	YRGKGGGGKKBMK	B1H Zhu et al.(2011) Opa_SANGER_5_FBgn0003002	0.812	0.978
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
TC010234-PA	C2H2 ZF	181	208	HACFWQNCSRNGRPFKAKYKLVNHIRVH
TC010234-PA	C2H2 ZF	214	238	FPCPFPGCGKVFARSENLKIHKRTH
TC010234-PA	C2H2 ZF	244	268	FKCEYEGCDRRFANSSDRKKHSHVH
TC010234-PA	C2H2 ZF	274	298	YNCRVSGCDKSYTHPSSLRKHMKVH

Links
Other C2H2 ZF family TFs
Other *Tribolium castaneum* TFs