CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0H00790
(
Tetrapisispora phaffii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TPHA_0H00790
T130512_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RPN4
M00017_2.00
Saccharomyces cerevisiae
NNCGCCACCN
NGGTGGCGNN
PBM
Badis et al.(2008)
RPN4_2137
0.797
0.927
RPN4
M01525_2.00
Saccharomyces cerevisiae
NWWWWWWWWN
NWWWWWWWWN
PBM
Zhu et al.(2009)
Rpn4
0.797
0.927
RPN4
M07447_2.00
Saccharomyces cerevisiae
CGCCACY
RGTGGCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0373.1
0.797
0.927
RPN4
M08511_2.00
Saccharomyces cerevisiae
NNNRGTGGCRAM
KTYGCCACYNNN
Misc
DeBoer et al.(2011)
YDL020C_1700
0.797
0.927
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE64288
C2H2 ZF
499
517
CSAEFSRPYDLTRHQNTIH
CCE64288
C2H2 ZF
524
556
FRCSECIRSLGDDGFKKTFSRLDALTRHIKSKH
Links
Other
C2H2 ZF
family TFs
Other
Tetrapisispora phaffii
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF17529
Drosophila ananassae
FBgn0094547
I
GG17540
Drosophila erecta
FBgn0109765
I
GH19128
Drosophila grimshawi
FBgn0126595
I
cwo
Drosophila melanogaster
FBgn0259938
D
GI23585
Drosophila mojavensis
FBgn0146311
I
GL23696
Drosophila persimilis
FBgn0161286
I
GA14324
Drosophila pseudoobscura
FBgn0074352
I
GM23880
Drosophila sechellia
FBgn0178745
I
GD18691
Drosophila simulans
FBgn0190212
I
GJ23560
Drosophila virilis
FBgn0210657
I
GK11546
Drosophila willistoni
FBgn0213557
I
GE26033
Drosophila yakuba
FBgn0243076
I
LLOJ000310
Lutzomyia longipalpis
LLOJ000310
I
LLOJ004317
Lutzomyia longipalpis
LLOJ004317
I
MDOA001233
Musca domestica
MDOA001233
I
PPAI005891
Phlebotomus papatasi
PPAI005891
I