CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Traes_3AL_35CA14632 *(Triticum aestivum)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	Traes_3AL_35CA14632	T130554_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
IDD1 M06824_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTWBYD	HRVWAAAMGACAAAANH	Dap-seq OMalley et al.(2016) At5g66730_colamp_a	0.822	0.952
IDD1 M06825_2.00	Arabidopsis thaliana	WDTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAHW	Dap-seq OMalley et al.(2016) At5g66730_col	0.822	0.952
IDD5 M06807_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTTSYD	HRSAAAAMGACAAAANH	Dap-seq OMalley et al.(2016) IDD5_colamp_a	0.794	0.905
IDD5 M06808_2.00	Arabidopsis thaliana	WTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAW	Dap-seq OMalley et al.(2016) IDD5_col	0.794	0.905
AT1G14580 M06797_2.00	Arabidopsis thaliana	NNNWWTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAWWNNN	Dap-seq OMalley et al.(2016) At1g14580_col_a	0.794	0.881
AT1G14580 M06798_2.00	Arabidopsis thaliana	NNTTTTGTCKTTTWSYD	HRSWAAAMGACAAAANN	Dap-seq OMalley et al.(2016) At1g14580_colamp_a	0.794	0.881
IDD7 M06803_2.00	Arabidopsis thaliana	NDDTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAHHN	Dap-seq OMalley et al.(2016) IDD7_col_a	0.788	0.881
IDD4 M06809_2.00	Arabidopsis thaliana	WWTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAWW	Dap-seq OMalley et al.(2016) IDD4_col_a	0.788	0.857
MGP M06795_2.00	Arabidopsis thaliana	HNHDWTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAWHDND	Dap-seq OMalley et al.(2016) MGP_col_a	0.788	0.857
MGP M06796_2.00	Arabidopsis thaliana	NNDTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAHNN	Dap-seq OMalley et al.(2016) MGP_colamp_a	0.788	0.857
NUC M06822_2.00	Arabidopsis thaliana	NNNNNTTTTGTCKTYTWBYD	HRVWARAMGACAAAANNNNN	Dap-seq OMalley et al.(2016) NUC_col_a	0.765	0.833
NUC M06823_2.00	Arabidopsis thaliana	NDTTTTGTCGTYTWNYD	HRNWARACGACAAAAHN	Dap-seq OMalley et al.(2016) NUC_colamp_a	0.765	0.833
JKD M06818_2.00	Arabidopsis thaliana	HHNWWTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAWWNDD	Dap-seq OMalley et al.(2016) JKD_col_a	0.759	0.857
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Traes_3AL_35CA14632.1	C2H2 ZF	158	179	WKCDKCSKKYAVQSDWKAHSKI
Traes_3AL_35CA14632.1	C2H2 ZF	179	204	ICGTREYKCDCGTVFSRRDSFITHRA

Links
Other C2H2 ZF family TFs
Other *Triticum aestivum* TFs

665 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
e_gw1.34.5.1	Cochliobolus heterostrophus C5	e_gw1.34.5.1	N	0.000
MAC_05311	Metarhizium acridum	MAC_05311	N	0.000
Pc20g11950	Penicillium chrysogenum	Pc20g11950	N	0.000
PCH_Pc20g11950	Penicillium rubens	PCH_Pc20g11950	N	0.000
PFICI_14999	Pestalotiopsis fici	PFICI_14999	N	0.000

Traes_3AL_35CA14632 (Triticum aestivum) C2H2 ZF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

665 Related TFs

Traes_3AL_35CA14632 **(Triticum aestivum)
C2H2 ZF**