CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRIATDRAFT_163506
(
Trichoderma atroviride
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIATDRAFT_163506
T130691_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.820
0.953
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.817
0.941
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK49691
C2H2 ZF
279
300
QRCSYPECGKTFKDLKAHMLTH
EHK49691
C2H2 ZF
307
333
KCPITTCEYHIKGFARKYDKNRHTLTH
EHK49691
C2H2 ZF
338
368
MVCGFCPGSGSASEKSFNRADVFKRHLTSVH
EHK49691
C2H2 ZF
398
417
KCSTCSQCFNNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma atroviride
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AER074W
Ashbya gossypii
AGOS_AER074W
N
CAGL0D00638g
Candida glabrata
CAGL0D00638g
N
Ecym_3250
Eremothecium cymbalariae
Ecym_3250
N
SU7_0530
Saccharomyces arboricola
SU7_0530
N
3838_YDL074C
Saccharomyces bayanus
3838_YDL074C
N
BRE1
Saccharomyces cerevisiae
YDL074C
N
SKUD_206218
Saccharomyces kudriavzevii
SKUD_206218
N
3485_Multiple
Saccharomyces paradoxus
3485_Multiple
N
Kpol_1055p70
Vanderwaltozyma polyspora
Kpol_1055p70
N
YALI0_B09559g
Yarrowia lipolytica
YALI0_B09559g
N
ZBAI_02714
Zygosaccharomyces bailii
ZBAI_02714
N
ZYRO0B12804g
Zygosaccharomyces rouxii
ZYRO0B12804g
N