CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_190729
(
Trichoderma virens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIVIDRAFT_190729
T130833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04848
M01880_2.00
Neurospora crassa
NNCYCCRMNN
NNKYGGRGNN
PBM
Weirauch et al.(2014)
pTH8844
0.786
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK23815
C2H2 ZF
38
60
LPCKYCSKRFRRVEHVQRHERTH
EHK23815
C2H2 ZF
66
91
FSCGWDRCGKTFGRRDLLVRHEKLVH
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma virens
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DEHA2G13156g
Debaryomyces hansenii
DEHA2G13156g
N