blmp-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00003847 T131566_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including dauer entry; negative regulation of distal tip cell migration; and regulation of transcription by RNA polymerase II. Acts upstream of or within determination of adult lifespan. Located in cytoplasm and nucleus. Is expressed in several structures, including distal tip cell; dorsal nerve cord; enteric muscle; hypodermis; and neurons. Orthologous to human PRDM1 (PR/SET domain 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00		 Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1		 (Direct) (Direct)
blmp-1
M08195_2.00		 Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F25D7.3a C2H2 ZF 508 530
F25D7.3a C2H2 ZF 536 558
F25D7.3a C2H2 ZF 564 586
F25D7.3a C2H2 ZF 592 614
F25D7.3a C2H2 ZF 620 641
F25D7.3b C2H2 ZF 508 530
F25D7.3b C2H2 ZF 536 558
F25D7.3b C2H2 ZF 564 586
F25D7.3b C2H2 ZF 592 614
F25D7.3b C2H2 ZF 620 641

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

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21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action