CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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klu-2
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00022592
T131643_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu-2
M00645_2.00
Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN
PBM
Narasimhan et al.(2015)
pTH9354
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00645_2.00
C2H2 ZF
51
73
YYCFICEKDFRRPDILSRHTRRH
M00645_2.00
C2H2 ZF
79
101
FKCEDCGRFFSRSDHLRTHRRTH
M00645_2.00
C2H2 ZF
107
130
YHCCVCNYSARRRDVLTRHMSTRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZC328.2
C2H2 ZF
247
269
YYCFICEKDFRRPDILSRHTRRH
ZC328.2
C2H2 ZF
275
297
FKCEDCGRFFSRSDHLRTHRRTH
ZC328.2
C2H2 ZF
303
326
YHCCVCNYSARRRDVLTRHMSTRH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_145572
Bipolaris maydis
COCC4DRAFT_145572
N
COCMIDRAFT_98430
Bipolaris oryzae
COCMIDRAFT_98430
N
COCSADRAFT_89102
Bipolaris sorokiniana
COCSADRAFT_89102
N
COCVIDRAFT_111368
Bipolaris victoriae
COCVIDRAFT_111368
N
COCCADRAFT_87763
Bipolaris zeicola
COCCADRAFT_87763
N
estExt_Genewise1.C_230115
Cochliobolus heterostrophus C5
estExt_Genewise1.C_230115
N
LEMA_P057170.1
Leptosphaeria maculans
LEMA_P057170.1
N
SNOG_12661
Phaeosphaeria nodorum
SNOG_12661
N
PTT_09487
Pyrenophora teres
PTT_09487
N
PTRG_11318
Pyrenophora triticirepentis
PTRG_11318
N
SETTUDRAFT_138486
Setosphaeria turcica
SETTUDRAFT_138486
N