CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG012555.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG012555.1
T133296_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG012555.1
C2H2 ZF
217
240
CHSCCICGKSFPFQSSLSQHMRKH
Alligator_sinensis_CCG012555.1
C2H2 ZF
246
268
YKCPYCDHRASQKGNLKIHIRSH
Alligator_sinensis_CCG012555.1
C2H2 ZF
419
441
FPCEVCGQAFSQTWFLKAHMKKH
Alligator_sinensis_CCG012555.1
C2H2 ZF
449
469
CHICGRRFKEPWFLKNHMKAH
Alligator_sinensis_CCG012555.1
C2H2 ZF
507
528
VCTKCGNLFTNMESLKAHNAVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g8507
Steinernema carpocapsae
L596_g8507
N
L889_g4055
Steinernema feltiae
L889_g4055
N
L893_g34054
Steinernema glaseri
L893_g34054
N
L898_g30050
Steinernema monticolum
L898_g30050
N