CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG013644.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG013644.1
T133303_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG013644.1
C2H2 ZF
74
96
LICGDCGKSFARKSDFKVHQRIH
Alligator_sinensis_CCG013644.1
C2H2 ZF
102
124
YTCSYCSKGFYQASMVRRHERTH
Alligator_sinensis_CCG013644.1
C2H2 ZF
130
152
YRCSVCDKSFARSTSLLIHQNTH
Alligator_sinensis_CCG013644.1
C2H2 ZF
158
180
YECPFCEKTFSDPSTLLQHRKMH
Alligator_sinensis_CCG013644.1
C2H2 ZF
186
208
FHCGICNKSFSQSSSFTFHRATH
Alligator_sinensis_CCG013644.1
C2H2 ZF
214
236
FVCADCGKAFIRSTALLKHRQTH
Alligator_sinensis_CCG013644.1
C2H2 ZF
241
263
FRCGECSKVFPKLSGLRSHQRMH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_110198
Ceriporiopsis subvermispora
CERSUDRAFT_110198
N
PHACADRAFT_246999
Phanerochaete carnosa
PHACADRAFT_246999
N
PHLGIDRAFT_114591
Phlebiopsis gigantea
PHLGIDRAFT_114591
N
PIIN_05447
Piriformospora indica
PIIN_05447
N
M407DRAFT_16533
Tulasnella calospora
M407DRAFT_16533
N