CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG021039.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG021039.1
T133452_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG021039.1
C2H2 ZF
10
32
FVCKVCGKGFRQASTLCRHKIIH
Alligator_sinensis_CCG021039.1
C2H2 ZF
38
60
HKCNQCGKAFNRSSTLNTHTRIH
Alligator_sinensis_CCG021039.1
C2H2 ZF
66
88
FVCEFCGKGFHQKGNYKNHKLTH
Alligator_sinensis_CCG021039.1
C2H2 ZF
94
116
FKCNICNKAFHQVYNLTFHMHTH
Alligator_sinensis_CCG021039.1
C2H2 ZF
122
145
FTCPTCGKGFCRNFDLKKHVRKLH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10003456
Chelonia mydas
Cmyd_10003456
N
0.827
KGM_06814
Danaus plexippus
KGM_06814
N
0.804
ENSDORG00000002484
Dipodomys ordii
ENSDORG00000002484
N
0.827
Fezf2
Dipodomys ordii
ENSDORG00000000030
N
0.823
FEZF1
Echinops telfairi
ENSETEG00000020278
N
0.827
FEZF1
Erinaceus europaeus
ENSEEUG00000002685
N
0.827
FEZF2
Gorilla gorilla
ENSGGOG00000026200
I
0.823
HDID_0001087701
Hymenolepis diminuta
HDID_0001087701
N
0.774
ENSMICG00000001950
Microcebus murinus
ENSMICG00000001950
N
0.827
Myotis_brandtii_AASS_10009316
Myotis brandtii
Myotis_brandtii_AASS_10009316
N
0.810
NEMVEDRAFT_v1g230810
Nematostella vectensis
NEMVEDRAFT_v1g230810
N
0.792
FEZF1
Ochotona princeps
ENSOPRG00000015502
N
0.827
Ogr03134
Ophisaurus gracilis
Ogr03134
N
0.827
FEZF1
Pan troglodytes
ENSPTRG00000019631
N
0.827
ENSPPYG00000017951
Pongo abelii
ENSPPYG00000017951
N
0.827
FEZF1
Procavia capensis
ENSPCAG00000011405
N
0.827
FEZF1
Tupaia belangeri
ENSTBEG00000005307
N
0.827
ENSTTRG00000013155
Tursiops truncatus
ENSTTRG00000013155
N
0.815
FEZF1
Vicugna pacos
ENSVPAG00000002991
N
0.827